Literature DB >> 17190816

Structure and quantum chemical characterization of chloroperoxidase compound 0, a common reaction intermediate of diverse heme enzymes.

Karin Kühnel1, Etienne Derat, James Terner, Sason Shaik, Ilme Schlichting.   

Abstract

We have determined the crystal structure of the chloroperoxidase (CPO) hydroperoxo reaction intermediate (CPO compound 0) at 1.75-A resolution. The intermediate was generated through controlled photoreduction of the CPO oxygen complex during x-ray data collection, which was monitored by recording of the crystal absorption spectra. Initially, the peroxo-anion species was formed and then protonated to yield compound 0. Quantum chemical calculations indicate that the peroxo-anion species is not stable and collapses instantaneously to compound 0. Compound 0 is present in the ferric low-spin doublet ground state and is characterized by a long O O bond length of 1.5 A and a Fe O bond distance of 1.8 A, which is also observed in the crystal structure.

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Year:  2006        PMID: 17190816      PMCID: PMC1765485          DOI: 10.1073/pnas.0606285103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

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Authors:  Masanori Sono; Mark P. Roach; Eric D. Coulter; John H. Dawson
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

2.  Parameters affecting the X-ray dose absorbed by macromolecular crystals.

Authors:  James W Murray; Enrique Rudiño-Piñera; Robin Leslie Owen; Martin Grininger; Raimond B G Ravelli; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2005-04-14       Impact factor: 2.616

Review 3.  Structure and chemistry of cytochrome P450.

Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar; Ilme Schlichting
Journal:  Chem Rev       Date:  2005-06       Impact factor: 60.622

4.  Identification of intermediates in the catalytic cycle of chloroperoxidase.

Authors:  H A Wagenknecht; W D Woggon
Journal:  Chem Biol       Date:  1997-05

5.  Thirty years of microbial P450 monooxygenase research: peroxo-heme intermediates--the central bus station in heme oxygenase catalysis.

Authors:  Stephen G Sligar; Thomas M Makris; Ilia G Denisov
Journal:  Biochem Biophys Res Commun       Date:  2005-08-24       Impact factor: 3.575

6.  An electron paramagnetic resonance study of the high and low spin forms of chloroperoxidase.

Authors:  P F Hollenberg; L P Hager; W E Blumberg; J Peisach
Journal:  J Biol Chem       Date:  1980-05-25       Impact factor: 5.157

7.  Effects of a thiolate axial ligand on the pi-->pi* electronic states of oxoferryl porphyrins: a study of the optical and resonance Raman spectra of compounds I and II of chloroperoxidase.

Authors:  T Egawa; D A Proshlyakov; H Miki; R Makino; T Ogura; T Kitagawa; Y Ishimura
Journal:  J Biol Inorg Chem       Date:  2001-01       Impact factor: 3.358

8.  Hydroxylation of camphor by reduced oxy-cytochrome P450cam: mechanistic implications of EPR and ENDOR studies of catalytic intermediates in native and mutant enzymes.

Authors:  R Davydov; T M Makris; V Kofman; D E Werst; S G Sligar; B M Hoffman
Journal:  J Am Chem Soc       Date:  2001-02-21       Impact factor: 15.419

9.  Kinetics of interconversion of ferrous enzymes, compound II and compound III, of wild-type synechocystis catalase-peroxidase and Y249F: proposal for the catalatic mechanism.

Authors:  Christa Jakopitsch; Anuruddhika Wanasinghe; Walter Jantschko; Paul G Furtmüller; Christian Obinger
Journal:  J Biol Chem       Date:  2005-01-06       Impact factor: 5.157

Review 10.  Peroxide-utilizing biocatalysts: structural and functional diversity of heme-containing enzymes.

Authors:  Isamu Matsunaga; Yoshitsugu Shiro
Journal:  Curr Opin Chem Biol       Date:  2004-04       Impact factor: 8.822

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  25 in total

Review 1.  Synergy within structural biology of single crystal optical spectroscopy and X-ray crystallography.

Authors:  Teresa De la Mora-Rey; Carrie M Wilmot
Journal:  Curr Opin Struct Biol       Date:  2007-10-23       Impact factor: 6.809

2.  Resonance Raman detection of the hydroperoxo intermediate in the cytochrome P450 enzymatic cycle.

Authors:  Piotr J Mak; Ilia G Denisov; Doreen Victoria; Thomas M Makris; Tianjing Deng; Stephen G Sligar; James R Kincaid
Journal:  J Am Chem Soc       Date:  2007-04-27       Impact factor: 15.419

3.  Crystal structures of CO and NO adducts of MauG in complex with pre-methylamine dehydrogenase: implications for the mechanism of dioxygen activation.

Authors:  Erik T Yukl; Brandon R Goblirsch; Victor L Davidson; Carrie M Wilmot
Journal:  Biochemistry       Date:  2011-03-16       Impact factor: 3.162

Review 4.  Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins.

Authors:  Xiongyi Huang; John T Groves
Journal:  Chem Rev       Date:  2017-12-29       Impact factor: 60.622

5.  Compound I is the reactive intermediate in the first monooxygenation step during conversion of cholesterol to pregnenolone by cytochrome P450scc: EPR/ENDOR/cryoreduction/annealing studies.

Authors:  Roman Davydov; Andrey A Gilep; Natallia V Strushkevich; Sergey A Usanov; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2012-10-05       Impact factor: 15.419

6.  Temperature-dependent macromolecular X-ray crystallography.

Authors:  Martin Weik; Jacques Philippe Colletier
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 8.  Correlated single-crystal electronic absorption spectroscopy and X-ray crystallography at NSLS beamline X26-C.

Authors:  Allen M Orville; Richard Buono; Matt Cowan; Annie Héroux; Grace Shea-McCarthy; Dieter K Schneider; John M Skinner; Michael J Skinner; Deborah Stoner-Ma; Robert M Sweet
Journal:  J Synchrotron Radiat       Date:  2011-03-19       Impact factor: 2.616

9.  Characterization of a thiolato iron(III) Peroxy dianion complex.

Authors:  Aidan R McDonald; Katherine M Van Heuvelen; Yisong Guo; Feifei Li; Emile L Bominaar; Eckard Münck; Lawrence Que
Journal:  Angew Chem Int Ed Engl       Date:  2012-08-06       Impact factor: 15.336

10.  The ferric-hydroperoxo complex of chloroperoxidase.

Authors:  Ilia G Denisov; John H Dawson; Lowell P Hager; Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2007-10-01       Impact factor: 3.575

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