Literature DB >> 17959373

Synergy within structural biology of single crystal optical spectroscopy and X-ray crystallography.

Teresa De la Mora-Rey1, Carrie M Wilmot.   

Abstract

Advances in the adaptation of optical spectroscopy to monitor photo-induced or enzyme-catalyzed reactions in the crystalline state have enabled X-ray crystal structures to be accurately linked with spectroscopically defined intermediates. This, in turn, has led to a deeper understanding of the role protein structural changes play in function. The integration of optical spectroscopy with X-ray crystallography is growing and now extends beyond linking crystal structure to reaction intermediate. Recent examples of this synergy include applications in protein crystallization, X-ray data acquisition, radiation damage, and acquisition of phase information important for structure determination.

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Year:  2007        PMID: 17959373      PMCID: PMC2134968          DOI: 10.1016/j.sbi.2007.09.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  43 in total

Review 1.  Advances in kinetic protein crystallography.

Authors:  Dominique Bourgeois; Antoine Royant
Journal:  Curr Opin Struct Biol       Date:  2005-10       Impact factor: 6.809

2.  Improving radiation-damage substructures for RIP.

Authors:  Max H Nanao; George M Sheldrick; Raimond B G Ravelli
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-08-16

3.  Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage.

Authors:  Anatoly P Dubnovitsky; Raimond B G Ravelli; Alexander N Popov; Anastassios C Papageorgiou
Journal:  Protein Sci       Date:  2005-05-09       Impact factor: 6.725

Review 4.  Cryocooling and radiation damage in macromolecular crystallography.

Authors:  Elspeth F Garman; Robin Leslie Owen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

5.  Molecular basis of photoprotection and control of photosynthetic light-harvesting.

Authors:  Andrew A Pascal; Zhenfeng Liu; Koen Broess; Bart van Oort; Herbert van Amerongen; Chao Wang; Peter Horton; Bruno Robert; Wenrui Chang; Alexander Ruban
Journal:  Nature       Date:  2005-07-07       Impact factor: 49.962

6.  Partial dehydration of the retinal binding pocket and proof for photochemical deprotonation of the retinal Schiff base in bicelle bacteriorhodopsin crystals.

Authors:  Laurie S Sanii; Mostafa A El-Sayed
Journal:  Photochem Photobiol       Date:  2005 Nov-Dec       Impact factor: 3.421

7.  Activation and catalysis of the di-heme cytochrome c peroxidase from Paracoccus pantotrophus.

Authors:  Aude Echalier; Celia F Goodhew; Graham W Pettigrew; Vilmos Fülöp
Journal:  Structure       Date:  2006-01       Impact factor: 5.006

8.  Conformational regulation of charge recombination reactions in a photosynthetic bacterial reaction center.

Authors:  Gergely Katona; Arjan Snijder; Pontus Gourdon; Ulf Andréasson; Orjan Hansson; Lars-Erik Andréasson; Richard Neutze
Journal:  Nat Struct Mol Biol       Date:  2005-06-05       Impact factor: 15.369

9.  High resolution crystal structures of the trans-enamine intermediates formed by sulbactam and clavulanic acid and E166A SHV-1 {beta}-lactamase.

Authors:  Pius S Padayatti; Marion S Helfand; Monica A Totir; Marianne P Carey; Paul R Carey; Robert A Bonomo; Focco van den Akker
Journal:  J Biol Chem       Date:  2005-07-29       Impact factor: 5.157

10.  Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.

Authors:  Gergely Katona; Philippe Carpentier; Vincent Nivière; Patricia Amara; Virgile Adam; Jérémy Ohana; Nikolay Tsanov; Dominique Bourgeois
Journal:  Science       Date:  2007-04-20       Impact factor: 47.728

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  11 in total

1.  Temperature-dependent macromolecular X-ray crystallography.

Authors:  Martin Weik; Jacques Philippe Colletier
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 2.  Correlated single-crystal electronic absorption spectroscopy and X-ray crystallography at NSLS beamline X26-C.

Authors:  Allen M Orville; Richard Buono; Matt Cowan; Annie Héroux; Grace Shea-McCarthy; Dieter K Schneider; John M Skinner; Michael J Skinner; Deborah Stoner-Ma; Robert M Sweet
Journal:  J Synchrotron Radiat       Date:  2011-03-19       Impact factor: 2.616

3.  Crystallographic, spectroscopic, and computational analysis of a flavin C4a-oxygen adduct in choline oxidase.

Authors:  Allen M Orville; George T Lountos; Steffan Finnegan; Giovanni Gadda; Rajeev Prabhakar
Journal:  Biochemistry       Date:  2009-02-03       Impact factor: 3.162

4.  Single-crystal Raman spectroscopy and X-ray crystallography at beamline X26-C of the NSLS.

Authors:  Deborah Stoner-Ma; John M Skinner; Dieter K Schneider; Matt Cowan; Robert M Sweet; Allen M Orville
Journal:  J Synchrotron Radiat       Date:  2010-11-05       Impact factor: 2.616

Review 5.  From protein structure to function via single crystal optical spectroscopy.

Authors:  Luca Ronda; Stefano Bruno; Stefano Bettati; Paola Storici; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2015-04-28

6.  A new on-axis micro-spectrophotometer for combining Raman, fluorescence and UV/Vis absorption spectroscopy with macromolecular crystallography at the Swiss Light Source.

Authors:  Guillaume Pompidor; Florian S N Dworkowski; Vincent Thominet; Clemens Schulze-Briese; Martin R Fuchs
Journal:  J Synchrotron Radiat       Date:  2013-07-05       Impact factor: 2.616

7.  Towards accurate structural characterization of metal centres in protein crystals: the structures of Ni and Cu T(6) bovine insulin derivatives.

Authors:  Christian Grundahl Frankaer; Susanne Mossin; Kenny Ståhl; Pernille Harris
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-12-24

8.  A new on-axis multimode spectrometer for the macromolecular crystallography beamlines of the Swiss Light Source.

Authors:  Robin L Owen; Arwen R Pearson; Alke Meents; Pirmin Boehler; Vincent Thominet; Clemens Schulze-Briese
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

9.  Colouring cryo-cooled crystals: online microspectrophotometry.

Authors:  John McGeehan; Raimond B G Ravelli; James W Murray; Robin Leslie Owen; Florent Cipriani; Sean McSweeney; Martin Weik; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

10.  Metalloprotein Crystallography: More than a Structure.

Authors:  Sarah E J Bowman; Jennifer Bridwell-Rabb; Catherine L Drennan
Journal:  Acc Chem Res       Date:  2016-03-15       Impact factor: 22.384

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