Literature DB >> 23039857

Compound I is the reactive intermediate in the first monooxygenation step during conversion of cholesterol to pregnenolone by cytochrome P450scc: EPR/ENDOR/cryoreduction/annealing studies.

Roman Davydov1, Andrey A Gilep, Natallia V Strushkevich, Sergey A Usanov, Brian M Hoffman.   

Abstract

Cytochrome P450scc (CYP11A1) catalyzes conversion of cholesterol (CH) to pregnenolone, the precursor to all steroid hormones. This process proceeds via three sequential monooxygenation reactions: two stereospecific hydroxylations with formation first of 22R-hydroxycholesterol (22-HC) and then 20α,22R-dihydroxycholesterol (20,22-DHC), followed by C20-C22 bond cleavage. Herein we have employed EPR and ENDOR spectroscopy to characterize the intermediates in the first hydroxylation step by 77 K radiolytic one-electron cryoreduction and subsequent annealing of the ternary oxy-cytochrome P450scc-cholesterol complex. This approach is fully validated by the demonstration that the cryoreduced ternary complex of oxy-P450scc-CH is catalytically competent and hydroxylates cholesterol to form 22-HC with no detectable formation of 20-HC, just as occurs under physiological conditions. Cryoreduction of the ternary complex trapped at 77 K produces predominantly the hydroperoxy-ferriheme P450scc intermediate, along with a minor fraction of peroxo-ferriheme intermediate that converts into a new hydroperoxo-ferriheme species at 145 K. This behavior reveals that the distal pocket of the parent oxy-P450scc-cholesterol complex exhibits an efficient proton delivery network, with an ordered water molecule H-bonded to the distal oxygen of the dioxygen ligand. During annealing of the hydroperoxy-ferric P450scc intermediates at 185 K, they convert to the primary product complex in which CH has been converted to 22-HC. In this process, the hydroperoxy-ferric intermediate decays with a large solvent kinetic isotope effect, as expected when proton delivery to the terminal O leads to formation of Compound I (Cpd I). (1)H ENDOR measurements of the primary product formed in deuterated solvent show that the heme Fe(III) is coordinated to the 22R-O(1)H of 22-HC, where the (1)H is derived from substrate and exchanges to D after annealing at higher temperatures. These observations establish that Cpd I is the agent that hydroxylates CH, rather than the hydroperoxy-ferric heme.

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Year:  2012        PMID: 23039857      PMCID: PMC3491644          DOI: 10.1021/ja3067226

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  39 in total

1.  Proton transfer at helium temperatures during dioxygen activation by heme monooxygenases.

Authors:  Roman Davydov; Sergey Chemerisov; David E Werst; Tijana Rajh; Toshitaka Matsui; Masao Ikeda-Saito; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2004-12-15       Impact factor: 15.419

Review 2.  Structure and chemistry of cytochrome P450.

Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar; Ilme Schlichting
Journal:  Chem Rev       Date:  2005-06       Impact factor: 60.622

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4.  Structure and quantum chemical characterization of chloroperoxidase compound 0, a common reaction intermediate of diverse heme enzymes.

Authors:  Karin Kühnel; Etienne Derat; James Terner; Sason Shaik; Ilme Schlichting
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

5.  Conformational dynamics and molecular interaction reactions of recombinant cytochrome p450scc (CYP11A1) detected by fluorescence energy transfer.

Authors:  G I Lepesheva; N V Strushkevich; S A Usanov
Journal:  Biochim Biophys Acta       Date:  1999-09-14

6.  New features in the catalytic cycle of cytochrome P450 during the formation of compound I from compound 0.

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Journal:  J Phys Chem B       Date:  2005-10-27       Impact factor: 2.991

Review 7.  Progesterone synthesis by the human placenta.

Authors:  Robert C Tuckey
Journal:  Placenta       Date:  2005-04       Impact factor: 3.481

Review 8.  Models and mechanisms of O-O bond activation by cytochrome P450. A critical assessment of the potential role of multiple active intermediates in oxidative catalysis.

Authors:  Peter Hlavica
Journal:  Eur J Biochem       Date:  2004-11

9.  The catalytic pathway of cytochrome p450cam at atomic resolution.

Authors:  I Schlichting; J Berendzen; K Chu; A M Stock; S A Maves; D E Benson; R M Sweet; D Ringe; G A Petsko; S G Sligar
Journal:  Science       Date:  2000-03-03       Impact factor: 47.728

10.  Compound I of nitric oxide synthase: the active site protonation state.

Authors:  Kyung-Bin Cho; Etienne Derat; Sason Shaik
Journal:  J Am Chem Soc       Date:  2007-02-24       Impact factor: 15.419

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  14 in total

1.  Drug modulation of water-heme interactions in low-spin P450 complexes of CYP2C9d and CYP125A1.

Authors:  Kip P Conner; Alex A Cruce; Matthew D Krzyaniak; Alina M Schimpf; Daniel J Frank; Paul Ortiz de Montellano; William M Atkins; Michael K Bowman
Journal:  Biochemistry       Date:  2015-01-29       Impact factor: 3.162

Review 2.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

Review 3.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

Review 4.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

5.  Active Site Structures of CYP11A1 in the Presence of Its Physiological Substrates and Alterations upon Binding of Adrenodoxin.

Authors:  Qianhong Zhu; Piotr J Mak; Robert C Tuckey; James R Kincaid
Journal:  Biochemistry       Date:  2017-10-20       Impact factor: 3.162

6.  Hole hopping through tyrosine/tryptophan chains protects proteins from oxidative damage.

Authors:  Harry B Gray; Jay R Winkler
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

7.  Isotope-Labeling Studies Support the Electrophilic Compound I Iron Active Species, FeO(3+), for the Carbon-Carbon Bond Cleavage Reaction of the Cholesterol Side-Chain Cleavage Enzyme, Cytochrome P450 11A1.

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Journal:  J Am Chem Soc       Date:  2016-09-12       Impact factor: 15.419

8.  Comparison of the Mechanisms of Heme Hydroxylation by Heme Oxygenases-1 and -2: Kinetic and Cryoreduction Studies.

Authors:  Roman Davydov; Angela S Fleischhacker; Ireena Bagai; Brian M Hoffman; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2015-12-23       Impact factor: 3.162

9.  Evidence That Compound I Is the Active Species in Both the Hydroxylase and Lyase Steps by Which P450scc Converts Cholesterol to Pregnenolone: EPR/ENDOR/Cryoreduction/Annealing Studies.

Authors:  Roman Davydov; Natallia Strushkevich; David Smil; Aliaksei Yantsevich; Andrey Gilep; Sergey Usanov; Brian M Hoffman
Journal:  Biochemistry       Date:  2015-11-25       Impact factor: 3.162

10.  An Engineered Glutamate in Biosynthetic Models of Heme-Copper Oxidases Drives Complete Product Selectivity by Tuning the Hydrogen-Bonding Network.

Authors:  Igor D Petrik; Roman Davydov; Maximilian Kahle; Braddock Sandoval; Sudharsan Dwaraknath; Pia Ädelroth; Brian Hoffman; Yi Lu
Journal:  Biochemistry       Date:  2021-01-19       Impact factor: 3.162

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