Literature DB >> 17142899

Crystallization and preliminary X-ray diffraction studies of the terminal oxygenase component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177.

Kengo Inoue1, Yuji Ashikawa, Yusuke Usami, Haruko Noguchi, Zui Fujimoto, Hisakazu Yamane, Hideaki Nojiri.   

Abstract

Carbazole 1,9a-dioxygenase (CARDO) catalyzes the dihydroxylation of carbazole by angular-position (C9a) carbon bonding to the imino nitrogen and its adjacent C1 carbon. CARDO consists of a terminal oxygenase component and two electron-transfer components: ferredoxin and ferredoxin reductase. The terminal oxygenase component (43.9 kDa) of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177 was crystallized at 293 K using the hanging-drop vapour-diffusion method with PEG 8000 as the precipitant. The crystals diffract to 2.3 A resolution and belong to space group C2.

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Year:  2006        PMID： 17142899      PMCID： PMC2225353          DOI： 10.1107/S1744309106044939

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN： 1744-3091


  20 in total

1.  Crystallization and preliminary X-ray diffraction analysis of the electron-transfer complex between the terminal oxygenase component and ferredoxin in the Rieske non-haem iron oxygenase system carbazole 1,9a-dioxygenase.

Authors:  Yuji Ashikawa; Zui Fujimoto; Haruko Noguchi; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Hideaki Nojiri
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-06-01

Review 2.  Bacterial metabolism of fluorene, dibenzofuran, dibenzothiophene, and carbazole.

Authors:  D C Bressler; P M Fedorak
Journal:  Can J Microbiol       Date:  2000-05       Impact factor: 2.419

3.  Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features.

Authors:  H Habe; J S Chung; J H Lee; K Kasuga; T Yoshida; H Nojiri; T Omori
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

4.  Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel gram-positive carbazole-degrading bacterium.

Authors:  Kengo Inoue; Hiroshi Habe; Hisakazu Yamane; Toshio Omori; Hideaki Nojiri
Journal:  FEMS Microbiol Lett       Date:  2005-04-01       Impact factor: 2.742

Review 5.  Rieske business: structure-function of Rieske non-heme oxygenases.

Authors:  Daniel J Ferraro; Lokesh Gakhar; S Ramaswamy
Journal:  Biochem Biophys Res Commun       Date:  2005-09-08       Impact factor: 3.575

Review 6.  Molecular bases of aerobic bacterial degradation of dioxins: involvement of angular dioxygenation.

Authors:  Hideaki Nojiri; Toshio Omori
Journal:  Biosci Biotechnol Biochem       Date:  2002-10       Impact factor: 2.043

7.  Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177.

Authors:  Kengo Inoue; Hiroshi Habe; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

8.  Plasmid pCAR3 contains multiple gene sets involved in the conversion of carbazole to anthranilate.

Authors:  Masaaki Urata; Hiromasa Uchimura; Haruko Noguchi; Tomoya Sakaguchi; Tetsuo Takemura; Kaori Eto; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

9.  Electron transfer complex formation between oxygenase and ferredoxin components in Rieske nonheme iron oxygenase system.

Authors:  Yuji Ashikawa; Zui Fujimoto; Haruko Noguchi; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Hideaki Nojiri
Journal:  Structure       Date:  2006-12       Impact factor: 5.006

10.  Crystal structure of the ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system.

Authors:  Jeong-Won Nam; Haruko Noguchi; Zui Fujimoto; Hiroshi Mizuno; Yuji Ashikawa; Mitsuru Abo; Shinya Fushinobu; Nobuyuki Kobashi; Takayoshi Wakagi; Kenichi Iwata; Takako Yoshida; Hiroshi Habe; Hisakazu Yamane; Toshio Omori; Hideaki Nojiri
Journal:  Proteins       Date:  2005-03-01
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  2 in total

1.  Crystallization and preliminary crystallographic analysis of the ferredoxin component of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177.

Authors:  Kengo Inoue; Yuji Ashikawa; Yusuke Usami; Haruko Noguchi; Zui Fujimoto; Hisakazu Yamane; Hideaki Nojiri
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-09-19

2.  Crystallization and preliminary X-ray diffraction studies of a novel ferredoxin involved in the dioxygenation of carbazole by Novosphingobium sp. KA1.

Authors:  Takashi Umeda; Junichi Katsuki; Yusuke Usami; Kengo Inoue; Haruko Noguchi; Zui Fujimoto; Yuji Ashikawa; Hisakazu Yamane; Hideaki Nojiri
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-06-11
  2 in total

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