Literature DB >> 20224548

Key residues on microtubule responsible for activation of kinesin ATPase.

Seiichi Uchimura1, Yusuke Oguchi, You Hachikubo, Shin'ichi Ishiwata, Etsuko Muto.   

Abstract

Microtubule (MT) binding accelerates the rate of ATP hydrolysis in kinesin. To understand the underlying mechanism, using charged-to-alanine mutational analysis, we identified two independent sites in tubulin, which are critical for kinesin motility, namely, a cluster of negatively charged residues spanning the helix 11-12 (H11-12) loop and H12 of alpha-tubulin, and the negatively charged residues in H12 of beta-tubulin. Mutation in the alpha-tubulin-binding site results in a deceleration of ATP hydrolysis (k(cat)), whereas mutation in the beta-tubulin-binding site lowers the affinity for MTs (K(0.5)MT). The residue E415 in alpha-tubulin seems to be important for coupling MT binding and ATPase activation, because the mutation at this site results in a drastic reduction in the overall rate of ATP hydrolysis, largely due to a deceleration in the reaction of ADP release. Our results suggest that kinesin binding at a region containing alpha-E415 could transmit a signal to the kinesin nucleotide pocket, triggering its conformational change and leading to the release of ADP.

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Year:  2010        PMID: 20224548      PMCID: PMC2857467          DOI: 10.1038/emboj.2010.25

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  49 in total

1.  Kinesin-microtubule binding depends on both nucleotide state and loading direction.

Authors:  Sotaro Uemura; Kenji Kawaguchi; Junichiro Yajima; Masaki Edamatsu; Yoko Yano Toyoshima; Shin'ichi Ishiwata
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

2.  Equilibrium and transition between single- and double-headed binding of kinesin as revealed by single-molecule mechanics.

Authors:  Kenji Kawaguchi; Sotaro Uemura; Shin'ichi Ishiwata
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

Review 3.  Intracellular transport and kinesin superfamily proteins, KIFs: structure, function, and dynamics.

Authors:  Nobutaka Hirokawa; Yasuko Noda
Journal:  Physiol Rev       Date:  2008-07       Impact factor: 37.312

4.  Motor domain mutation traps kinesin as a microtubule rigor complex.

Authors:  Lisa M Klumpp; Katherine M Brendza; John M Rosenberg; Andreas Hoenger; Susan P Gilbert
Journal:  Biochemistry       Date:  2003-03-11       Impact factor: 3.162

5.  Modulation of kinesin binding by the C-termini of tubulin.

Authors:  Georgios Skiniotis; Jared C Cochran; Jens Müller; Eckhard Mandelkow; Susan P Gilbert; Andreas Hoenger
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

Review 6.  The kinetic mechanism of kinesin.

Authors:  Robert A Cross
Journal:  Trends Biochem Sci       Date:  2004-06       Impact factor: 13.807

7.  Understanding tubulin-Taxol interactions: mutations that impart Taxol binding to yeast tubulin.

Authors:  Mohan L Gupta; Claudia J Bode; Gunda I Georg; Richard H Himes
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-09       Impact factor: 11.205

8.  Large spectrum of lissencephaly and pachygyria phenotypes resulting from de novo missense mutations in tubulin alpha 1A (TUBA1A).

Authors:  Karine Poirier; David A Keays; Fiona Francis; Yoann Saillour; Nadia Bahi; Sylvie Manouvrier; Catherine Fallet-Bianco; Laurent Pasquier; Annick Toutain; Françoise Phan Dinh Tuy; Thierry Bienvenu; Sylvie Joriot; Sylvie Odent; Dorothée Ville; Isabelle Desguerre; Alice Goldenberg; Marie-Laure Moutard; Jean-Pierre Fryns; Hilde van Esch; Robert J Harvey; Christian Siebold; Jonathan Flint; Chérif Beldjord; Jamel Chelly
Journal:  Hum Mutat       Date:  2007-11       Impact factor: 4.878

9.  The initial phosphate burst in ATP hydrolysis by myosin and subfragment-1 as studied by a modified malachite green method for determination of inorganic phosphate.

Authors:  T Kodama; K Fukui; K Kometani
Journal:  J Biochem       Date:  1986-05       Impact factor: 3.387

10.  Mutations in alpha-tubulin cause abnormal neuronal migration in mice and lissencephaly in humans.

Authors:  David A Keays; Guoling Tian; Karine Poirier; Guo-Jen Huang; Christian Siebold; James Cleak; Peter L Oliver; Martin Fray; Robert J Harvey; Zoltán Molnár; Maria C Piñon; Neil Dear; William Valdar; Steve D M Brown; Kay E Davies; J Nicholas P Rawlins; Nicholas J Cowan; Patrick Nolan; Jamel Chelly; Jonathan Flint
Journal:  Cell       Date:  2007-01-12       Impact factor: 41.582

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  31 in total

1.  Disease-associated mutations in TUBA1A result in a spectrum of defects in the tubulin folding and heterodimer assembly pathway.

Authors:  Guoling Tian; Xavier H Jaglin; David A Keays; Fiona Francis; Jamel Chelly; Nicholas J Cowan
Journal:  Hum Mol Genet       Date:  2010-07-05       Impact factor: 6.150

2.  Effects of eribulin, vincristine, paclitaxel and ixabepilone on fast axonal transport and kinesin-1 driven microtubule gliding: implications for chemotherapy-induced peripheral neuropathy.

Authors:  Nichole E LaPointe; Gerardo Morfini; Scott T Brady; Stuart C Feinstein; Leslie Wilson; Mary Ann Jordan
Journal:  Neurotoxicology       Date:  2013-05-24       Impact factor: 4.294

3.  Near-atomic cryo-EM structure of PRC1 bound to the microtubule.

Authors:  Elizabeth H Kellogg; Stuart Howes; Shih-Chieh Ti; Erney Ramírez-Aportela; Tarun M Kapoor; Pablo Chacón; Eva Nogales
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-04       Impact factor: 11.205

4.  Allocating dissipation across a molecular machine cycle to maximize flux.

Authors:  Aidan I Brown; David A Sivak
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-03       Impact factor: 11.205

Review 5.  Molecular switch-like regulation in motor proteins.

Authors:  Sara Tafoya; Carlos Bustamante
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

6.  Native kinesin-1 does not bind preferentially to GTP-tubulin-rich microtubules in vitro.

Authors:  Qiaochu Li; Stephen J King; Jing Xu
Journal:  Cytoskeleton (Hoboken)       Date:  2017-07-24

7.  Anchor Effect of Interactions Between Kinesin's Nucleotide-Binding Pocket and Microtubule.

Authors:  Yumei Jin; Yizhao Geng; Lina Lü; Yilong Ma; Gang Lü; Hui Zhang; Qing Ji
Journal:  Cell Mol Bioeng       Date:  2017-02-15       Impact factor: 2.321

8.  Structural basis for microtubule binding and release by dynein.

Authors:  W B Redwine; R Hernandez-Lopez; S Zou; J Huang; S L Reck-Peterson; A E Leschziner
Journal:  Science       Date:  2012-09-21       Impact factor: 47.728

Review 9.  Microtubule dynamics: an interplay of biochemistry and mechanics.

Authors:  Gary J Brouhard; Luke M Rice
Journal:  Nat Rev Mol Cell Biol       Date:  2018-07       Impact factor: 94.444

10.  An inherited TUBB2B mutation alters a kinesin-binding site and causes polymicrogyria, CFEOM and axon dysinnervation.

Authors:  Gustav Y Cederquist; Anna Luchniak; Max A Tischfield; Maya Peeva; Yuyu Song; Manoj P Menezes; Wai-Man Chan; Caroline Andrews; Sheena Chew; Robyn V Jamieson; Lavier Gomes; Maree Flaherty; Patricia Ellen Grant; Mohan L Gupta; Elizabeth C Engle
Journal:  Hum Mol Genet       Date:  2012-09-21       Impact factor: 6.150

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