Literature DB >> 26747285

Affinity Purification and Characterization of Functional Tubulin from Cell Suspension Cultures of Arabidopsis and Tobacco.

Takashi Hotta1, Satoshi Fujita1, Seiichi Uchimura1, Masahiro Noguchi1, Taku Demura1, Etsuko Muto1, Takashi Hashimoto2.   

Abstract

Microtubules assemble into several distinct arrays that play important roles in cell division and cell morphogenesis. To decipher the mechanisms that regulate the dynamics and organization of this versatile cytoskeletal component, it is essential to establish in vitro assays that use functional tubulin. Although plant tubulin has been purified previously from protoplasts by reversible taxol-induced polymerization, a simple and efficient purification method has yet to be developed. Here, we used a Tumor Overexpressed Gene (TOG) column, in which the tubulin-binding domains of a yeast (Saccharomyces cerevisiae) TOG homolog are immobilized on resin, to isolate functional plant tubulin. We found that several hundred micrograms of pure tubulin can readily be purified from cell suspension cultures of tobacco (Nicotiana tabacum) and Arabidopsis (Arabidopsis thaliana). The tubulin purified by the TOG column showed high assembly competence, partly because of low levels of polymerization-inhibitory phosphorylation of α-tubulin. Compared with porcine brain tubulin, Arabidopsis tubulin is highly dynamic in vitro at both the plus and minus ends, exhibiting faster shrinkage rates and more frequent catastrophe events, and exhibits frequent spontaneous nucleation. Furthermore, our study shows that an internal histidine tag in α-tubulin can be used to prepare particular isotypes and specifically engineered versions of α-tubulin. In contrast to previous studies of plant tubulin, our mass spectrometry and immunoblot analyses failed to detect posttranslational modification of the isolated Arabidopsis tubulin or detected only low levels of posttranslational modification. This novel technology can be used to prepare assembly-competent, highly dynamic pure tubulin from plant cell cultures.
© 2016 American Society of Plant Biologists. All Rights Reserved.

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Year:  2016        PMID: 26747285      PMCID: PMC4775104          DOI: 10.1104/pp.15.01173

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  60 in total

1.  Fate of nascent microtubules organized at the M/G1 interface, as visualized by synchronized tobacco BY-2 cells stably expressing GFP-tubulin: time-sequence observations of the reorganization of cortical microtubules in living plant cells.

Authors:  F Kumagai; A Yoneda; T Tomida; T Sano; T Nagata; S Hasezawa
Journal:  Plant Cell Physiol       Date:  2001-07       Impact factor: 4.927

2.  Microtubule treadmilling in vitro investigated by fluorescence speckle and confocal microscopy.

Authors:  S Grego; V Cantillana; E D Salmon
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

3.  Tubulin polyglutamylase enzymes are members of the TTL domain protein family.

Authors:  Carsten Janke; Krzysztof Rogowski; Dorota Wloga; Catherine Regnard; Andrey V Kajava; Jean-Marc Strub; Nevzat Temurak; Juliette van Dijk; Dominique Boucher; Alain van Dorsselaer; Swati Suryavanshi; Jacek Gaertig; Bernard Eddé
Journal:  Science       Date:  2005-05-12       Impact factor: 47.728

4.  Identification of a strong binding site for kinesin on the microtubule using mutant analysis of tubulin.

Authors:  Seiichi Uchimura; Yusuke Oguchi; Miho Katsuki; Takeo Usui; Hiroyuki Osada; Jun-ichi Nikawa; Shin'ichi Ishiwata; Etsuko Muto
Journal:  EMBO J       Date:  2006-11-23       Impact factor: 11.598

5.  Microtubule assembly in the absence of added nucleotides.

Authors:  M L Shelanski; F Gaskin; C R Cantor
Journal:  Proc Natl Acad Sci U S A       Date:  1973-03       Impact factor: 11.205

Review 6.  Regulation of microtubule dynamics by TOG-domain proteins XMAP215/Dis1 and CLASP.

Authors:  Jawdat Al-Bassam; Fred Chang
Journal:  Trends Cell Biol       Date:  2011-07-23       Impact factor: 20.808

7.  Identification of zinc-responsive proteins in the roots of Arabidopsis thaliana using a highly improved method of two-dimensional electrophoresis.

Authors:  Yoichiro Fukao; Ali Ferjani; Masayuki Fujiwara; Yuka Nishimori; Iwao Ohtsu
Journal:  Plant Cell Physiol       Date:  2009-12       Impact factor: 4.927

8.  Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation.

Authors:  Tsuyoshi Nakagawa; Takayuki Kurose; Takeshi Hino; Katsunori Tanaka; Makoto Kawamukai; Yasuo Niwa; Kiminori Toyooka; Ken Matsuoka; Tetsuro Jinbo; Tetsuya Kimura
Journal:  J Biosci Bioeng       Date:  2007-07       Impact factor: 2.894

9.  Ring closure activates yeast γTuRC for species-specific microtubule nucleation.

Authors:  Justin M Kollman; Charles H Greenberg; Sam Li; Michelle Moritz; Alex Zelter; Kimberly K Fong; Jose-Jesus Fernandez; Andrej Sali; John Kilmartin; Trisha N Davis; David A Agard
Journal:  Nat Struct Mol Biol       Date:  2015-01-19       Impact factor: 15.369

10.  A tethered delivery mechanism explains the catalytic action of a microtubule polymerase.

Authors:  Pelin Ayaz; Sarah Munyoki; Elisabeth A Geyer; Felipe-Andrés Piedra; Emily S Vu; Raquel Bromberg; Zbyszek Otwinowski; Nick V Grishin; Chad A Brautigam; Luke M Rice
Journal:  Elife       Date:  2014-08-05       Impact factor: 8.140

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  14 in total

1.  Polyglutamylation of tubulin's C-terminal tail controls pausing and motility of kinesin-3 family member KIF1A.

Authors:  Dominique V Lessard; Oraya J Zinder; Takashi Hotta; Kristen J Verhey; Ryoma Ohi; Christopher L Berger
Journal:  J Biol Chem       Date:  2019-02-15       Impact factor: 5.157

Review 2.  Update: Plant Cortical Microtubule Arrays.

Authors:  Andrew Elliott; Sidney L Shaw
Journal:  Plant Physiol       Date:  2017-11-28       Impact factor: 8.340

3.  Posttranslational modification of plant microtubules.

Authors:  John Gardiner
Journal:  Plant Signal Behav       Date:  2019-09-06

4.  EML2-S constitutes a new class of proteins that recognizes and regulates the dynamics of tyrosinated microtubules.

Authors:  Takashi Hotta; Thomas S McAlear; Yang Yue; Takumi Higaki; Sarah E Haynes; Alexey I Nesvizhskii; David Sept; Kristen J Verhey; Susanne Bechstedt; Ryoma Ohi
Journal:  Curr Biol       Date:  2022-08-12       Impact factor: 10.900

5.  In Vitro Reconstitution of Microtubule Dynamics and Severing Imaged by Label-Free Interference-Reflection Microscopy.

Authors:  Yin-Wei Kuo; Jonathon Howard
Journal:  Methods Mol Biol       Date:  2022

6.  Parthenolide Destabilizes Microtubules by Covalently Modifying Tubulin.

Authors:  Takashi Hotta; Sarah E Haynes; Teresa L Blasius; Margo Gebbie; Emily L Eberhardt; David Sept; Michael Cianfrocco; Kristen J Verhey; Alexey I Nesvizhskii; Ryoma Ohi
Journal:  Curr Biol       Date:  2021-01-21       Impact factor: 10.834

7.  Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of Populus.

Authors:  Hao Hu; Xi Gu; Liang-Jiao Xue; Prashant S Swamy; Scott A Harding; Chung-Jui Tsai
Journal:  Front Plant Sci       Date:  2016-10-13       Impact factor: 5.753

8.  Novel Arabidopsis microtubule-associated proteins track growing microtubule plus ends.

Authors:  Jeh Haur Wong; Takashi Hashimoto
Journal:  BMC Plant Biol       Date:  2017-02-02       Impact factor: 4.215

9.  Directional cell expansion requires NIMA-related kinase 6 (NEK6)-mediated cortical microtubule destabilization.

Authors:  Shogo Takatani; Shinichiro Ozawa; Noriyoshi Yagi; Takashi Hotta; Takashi Hashimoto; Yuichiro Takahashi; Taku Takahashi; Hiroyasu Motose
Journal:  Sci Rep       Date:  2017-08-10       Impact factor: 4.379

10.  Evolutionary characterization and transcript profiling of β-tubulin genes in flax (Linum usitatissimum L.) during plant development.

Authors:  Floriana Gavazzi; Gaia Pigna; Luca Braglia; Silvia Gianì; Diego Breviario; Laura Morello
Journal:  BMC Plant Biol       Date:  2017-12-08       Impact factor: 4.215

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