Literature DB >> 17117860

X-ray crystal structures of manganese(II)-reconstituted and native toluene/o-xylene monooxygenase hydroxylase reveal rotamer shifts in conserved residues and an enhanced view of the protein interior.

Michael S McCormick1, Matthew H Sazinsky, Karen L Condon, Stephen J Lippard.   

Abstract

We report the X-ray crystal structures of native and manganese(II)-reconstituted toluene/o-xylene monooxygenase hydroxylase (ToMOH) from Pseudomonas stutzeri OX1 to 1.85 and 2.20 A resolution, respectively. The structures reveal that reduction of the dimetallic active site is accompanied by a carboxylate shift and alteration of the coordination environment for dioxygen binding and activation. A rotamer shift in a strategically placed asparagine 202 accompanies dimetallic center reduction and is proposed to influence protein component interactions. This rotamer shift is conserved between ToMOH and the corresponding residue in methane monooxygenase hydroxylase (MMOH). Previously unidentified hydrophobic pockets similar to those present in MMOH are assigned.

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Year:  2006        PMID: 17117860      PMCID: PMC1761687          DOI: 10.1021/ja064837r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

1.  Kinetics and activation thermodynamics of methane monooxygenase compound Q formation and reaction with substrates.

Authors:  B J Brazeau; J D Lipscomb
Journal:  Biochemistry       Date:  2000-11-07       Impact factor: 3.162

2.  Dioxygen activation at non-heme diiron centers: characterization of intermediates in a mutant form of toluene/o-xylene monooxygenase hydroxylase.

Authors:  Leslie J Murray; Ricardo García-Serres; Sunil Naik; Boi Hanh Huynh; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2006-06-14       Impact factor: 15.419

3.  X-ray absorption spectroscopic study of the reduced hydroxylases of methane monooxygenase and toluene/o-xylene monooxygenase: differences in active site structure and effects of the coupling proteins MMOB and ToMOD.

Authors:  Deanne Jackson Rudd; Matthew H Sazinsky; Stephen J Lippard; Britt Hedman; Keith O Hodgson
Journal:  Inorg Chem       Date:  2005-06-27       Impact factor: 5.165

4.  Crystal structures of the methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath): implications for substrate gating and component interactions.

Authors:  A C Rosenzweig; H Brandstetter; D A Whittington; P Nordlund; S J Lippard; C A Frederick
Journal:  Proteins       Date:  1997-10

5.  Methane monooxygenase hydroxylase and B component interactions.

Authors:  Jingyan Zhang; Bradley J Wallar; Codrina V Popescu; Daniel B Renner; David D Thomas; John D Lipscomb
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

6.  Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.

Authors:  D A Whittington; A C Rosenzweig; C A Frederick; S J Lippard
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

7.  Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site.

Authors:  D A Whittington; S J Lippard
Journal:  J Am Chem Soc       Date:  2001-02-07       Impact factor: 15.419

8.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

9.  Correlating structure with function in bacterial multicomponent monooxygenases and related diiron proteins.

Authors:  Matthew H Sazinsky; Stephen J Lippard
Journal:  Acc Chem Res       Date:  2006-08       Impact factor: 22.384

10.  Regulation of methane monooxygenase catalysis based on size exclusion and quantum tunneling.

Authors:  Hui Zheng; John D Lipscomb
Journal:  Biochemistry       Date:  2006-02-14       Impact factor: 3.162

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  18 in total

1.  Insights into the different dioxygen activation pathways of methane and toluene monooxygenase hydroxylases.

Authors:  Arteum D Bochevarov; Jianing Li; Woon Ju Song; Richard A Friesner; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2011-04-25       Impact factor: 15.419

2.  Structural consequences of effector protein complex formation in a diiron hydroxylase.

Authors:  Lucas J Bailey; Jason G McCoy; George N Phillips; Brian G Fox
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

Review 3.  Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.

Authors:  Andrew J Jasniewski; Lawrence Que
Journal:  Chem Rev       Date:  2018-02-05       Impact factor: 60.622

4.  X-ray structure of a hydroxylase-regulatory protein complex from a hydrocarbon-oxidizing multicomponent monooxygenase, Pseudomonas sp. OX1 phenol hydroxylase.

Authors:  Matthew H Sazinsky; Pete W Dunten; Michael S McCormick; Alberto DiDonato; Stephen J Lippard
Journal:  Biochemistry       Date:  2006-12-02       Impact factor: 3.162

5.  Analysis of substrate access to active sites in bacterial multicomponent monooxygenase hydroxylases: X-ray crystal structure of xenon-pressurized phenol hydroxylase from Pseudomonas sp. OX1.

Authors:  Michael S McCormick; Stephen J Lippard
Journal:  Biochemistry       Date:  2011-12-02       Impact factor: 3.162

6.  Synthesis, Characterization, and Oxygenation Studies of Carboxylate-Bridged Diiron(II) Complexes with Aromatic Substrates Tethered to Pyridine Ligands and the Formation of a Unique Trinuclear Complex.

Authors:  Simone Friedle; Stephen J Lippard
Journal:  Eur J Inorg Chem       Date:  2009-11-05       Impact factor: 2.524

7.  Tracking a defined route for O₂ migration in a dioxygen-activating diiron enzyme.

Authors:  Woon Ju Song; Grant Gucinski; Matthew H Sazinsky; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

Review 8.  Structure/function correlations over binuclear non-heme iron active sites.

Authors:  Edward I Solomon; Kiyoung Park
Journal:  J Biol Inorg Chem       Date:  2016-07-01       Impact factor: 3.358

9.  Characterization of the arene-oxidizing intermediate in ToMOH as a diiron(III) species.

Authors:  Leslie J Murray; Sunil G Naik; Danilo O Ortillo; Ricardo García-Serres; Jessica K Lee; Boi Hanh Huynh; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2007-10-30       Impact factor: 15.419

10.  Protein engineering of toluene monooxygenases for synthesis of chiral sulfoxides.

Authors:  Roi Feingersch; Janna Shainsky; Thomas K Wood; Ayelet Fishman
Journal:  Appl Environ Microbiol       Date:  2008-01-11       Impact factor: 4.792

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