Literature DB >> 18192418

Protein engineering of toluene monooxygenases for synthesis of chiral sulfoxides.

Roi Feingersch1, Janna Shainsky, Thomas K Wood, Ayelet Fishman.   

Abstract

Enantiopure sulfoxides are valuable asymmetric starting materials and are important chiral auxiliaries in organic synthesis. Toluene monooxygenases (TMOs) have been shown previously to catalyze regioselective hydroxylation of substituted benzenes and phenols. Here we show that TMOs are also capable of performing enantioselective oxidation reactions of aromatic sulfides. Mutagenesis of position V106 in the alpha-hydroxylase subunit of toluene ortho-monooxygenase (TOM) of Burkholderia cepacia G4 and the analogous position I100 in toluene 4-monooxygenase (T4MO) of Pseudomonas mendocina KR1 improved both rate and enantioselectivity. Variant TomA3 V106M of TOM oxidized methyl phenyl sulfide to the corresponding sulfoxide at a rate of 3.0 nmol/min/mg protein compared with 1.6 for the wild-type enzyme, and the enantiomeric excess (pro-S) increased from 51% for the wild type to 88% for this mutant. Similarly, T4MO variant TmoA I100G increased the wild-type oxidation rate by 1.7-fold, and the enantiomeric excess rose from 86% to 98% (pro-S). Both wild-type enzymes showed lower activity with methyl para-tolyl sulfide as a substrate, but the improvement in the activity and enantioselectivity of the mutants was more dramatic. For example, T4MO variant TmoA I100G oxidized methyl para-tolyl sulfide 11 times faster than the wild type did and changed the selectivity from 41% pro-R to 77% pro-S. A correlation between regioselectivity and enantioselectivity was shown for TMOs studied in this work. Using in silico homology modeling, it is shown that residue I100 in T4MO aids in steering the substrate into the active site at the end of the long entrance channel. It is further hypothesized that the main function of V106 in TOM is the proper positioning or docking of the substrate with respect to the diiron atoms. The results from this work suggest that when the substrate is not aligned correctly in the active site, the oxidation rate is decreased and enantioselectivity is impaired, resulting in products with both chiral configurations.

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Year:  2008        PMID: 18192418      PMCID: PMC2258606          DOI: 10.1128/AEM.01849-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  40 in total

1.  Recent biotechnological developments in the use of peroxidases.

Authors:  S Colonna; N Gaggero; C Richelmi; P Pasta
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2.  Saturation mutagenesis of toluene ortho-monooxygenase of Burkholderia cepacia G4 for Enhanced 1-naphthol synthesis and chloroform degradation.

Authors:  Lingyun Rui; Young Man Kwon; Ayelet Fishman; Kenneth F Reardon; Thomas K Wood
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

3.  Controlling the regiospecific oxidation of aromatics via active site engineering of toluene para-monooxygenase of Ralstonia pickettii PKO1.

Authors:  Ayelet Fishman; Ying Tao; Lingyun Rui; Thomas K Wood
Journal:  J Biol Chem       Date:  2004-10-21       Impact factor: 5.157

Review 4.  Biocatalysis for pharmaceutical intermediates: the future is now.

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Journal:  Trends Biotechnol       Date:  2006-12-20       Impact factor: 19.536

5.  Crystal structures of the methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath): implications for substrate gating and component interactions.

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Journal:  Proteins       Date:  1997-10

6.  Characterization and application of xylene monooxygenase for multistep biocatalysis.

Authors:  Bruno Bühler; Bernard Witholt; Bernhard Hauer; Andreas Schmid
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

7.  Correlating structure with function in bacterial multicomponent monooxygenases and related diiron proteins.

Authors:  Matthew H Sazinsky; Stephen J Lippard
Journal:  Acc Chem Res       Date:  2006-08       Impact factor: 22.384

8.  Functional expression of a fungal laccase in Saccharomyces cerevisiae by directed evolution.

Authors:  Thomas Bulter; Miguel Alcalde; Volker Sieber; Peter Meinhold; Christian Schlachtbauer; Frances H Arnold
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

9.  Altering toluene 4-monooxygenase by active-site engineering for the synthesis of 3-methoxycatechol, methoxyhydroquinone, and methylhydroquinone.

Authors:  Ying Tao; Ayelet Fishman; William E Bentley; Thomas K Wood
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

10.  Toluene 3-monooxygenase of Ralstonia pickettii PKO1 is a para-hydroxylating enzyme.

Authors:  Ayelet Fishman; Ying Tao; Thomas K Wood
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

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  13 in total

1.  When second best is good enough: another probabilistic look at saturation mutagenesis.

Authors:  Yuval Nov
Journal:  Appl Environ Microbiol       Date:  2011-10-28       Impact factor: 4.792

2.  Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate.

Authors:  Martina Pavlova; Martin Klvana; Zbynek Prokop; Radka Chaloupkova; Pavel Banas; Michal Otyepka; Rebecca C Wade; Masataka Tsuda; Yuji Nagata; Jiri Damborsky
Journal:  Nat Chem Biol       Date:  2009-08-23       Impact factor: 15.040

3.  Tuning the specificity of the recombinant multicomponent toluene o-xylene monooxygenase from Pseudomonas sp. strain OX1 for the biosynthesis of tyrosol from 2-phenylethanol.

Authors:  Eugenio Notomista; Roberta Scognamiglio; Luca Troncone; Giuliana Donadio; Alessandro Pezzella; Alberto Di Donato; Viviana Izzo
Journal:  Appl Environ Microbiol       Date:  2011-06-10       Impact factor: 4.792

4.  Improving biocatalyst performance by integrating statistical methods into protein engineering.

Authors:  Moran Brouk; Yuval Nov; Ayelet Fishman
Journal:  Appl Environ Microbiol       Date:  2010-08-13       Impact factor: 4.792

5.  Rapid methods for high-throughput detection of sulfoxides.

Authors:  Janna Shainsky; Netta-Lee Derry; Yael Leichtmann-Bardoogo; Thomas K Wood; Ayelet Fishman
Journal:  Appl Environ Microbiol       Date:  2009-05-22       Impact factor: 4.792

Review 6.  Engineering non-heme mono- and dioxygenases for biocatalysis.

Authors:  Adi Dror; Ayelet Fishman
Journal:  Comput Struct Biotechnol J       Date:  2012-10-23       Impact factor: 7.271

7.  Study of the TmoS/TmoT two-component system: towards the functional characterization of the family of TodS/TodT like systems.

Authors:  Hortencia Silva-Jiménez; Cristina García-Fontana; Bilge Hilal Cadirci; María Isabel Ramos-González; Juan Luis Ramos; Tino Krell
Journal:  Microb Biotechnol       Date:  2011-12-27       Impact factor: 5.813

8.  HotSpot Wizard: a web server for identification of hot spots in protein engineering.

Authors:  Antonin Pavelka; Eva Chovancova; Jiri Damborsky
Journal:  Nucleic Acids Res       Date:  2009-05-21       Impact factor: 16.971

9.  The Toluene o-Xylene Monooxygenase Enzymatic Activity for the Biosynthesis of Aromatic Antioxidants.

Authors:  Giuliana Donadio; Carmen Sarcinelli; Elio Pizzo; Eugenio Notomista; Alessandro Pezzella; Carlo Di Cristo; Federica De Lise; Alberto Di Donato; Viviana Izzo
Journal:  PLoS One       Date:  2015-04-27       Impact factor: 3.240

10.  Fitness loss and library size determination in saturation mutagenesis.

Authors:  Yuval Nov
Journal:  PLoS One       Date:  2013-07-03       Impact factor: 3.240

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