Literature DB >> 20671111

Vernalization-mediated VIN3 Induction Overcomes the LIKE-HETEROCHROMATIN PROTEIN1/POLYCOMB REPRESSION COMPLEX2-mediated epigenetic repression.

Dong-Hwan Kim1, Brett R Zografos, Sibum Sung.   

Abstract

VERNALIZATION INSENSITIVE3 (VIN3) induction by vernalization is one of the earliest events in the vernalization response of Arabidopsis (Arabidopsis thaliana). However, the mechanism responsible for vernalization-mediated VIN3 induction is poorly understood. Here, we show that the constitutive repression of VIN3 in the absence of the cold is due to multiple repressive components, including a transposable element-derived sequence, LIKE-HETEROCHROMATIN PROTEIN1 and POLYCOMB REPRESSION COMPLEX2. Furthermore, the full extent of VIN3 induction by vernalization requires activating complex components, including EARLY FLOWERING7 and EARLY FLOWERING IN SHORT DAYS. In addition, we observed dynamic changes in the histone modifications present at VIN3 chromatin during the course of vernalization. Our results show that the induction of VIN3 includes dynamic changes at the level of chromatin triggered by long-term cold exposure.

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Year:  2010        PMID: 20671111      PMCID: PMC2948996          DOI: 10.1104/pp.110.161083

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  48 in total

1.  Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

Authors:  U Johanson; J West; C Lister; S Michaels; R Amasino; C Dean
Journal:  Science       Date:  2000-10-13       Impact factor: 47.728

2.  The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

Authors:  Chris A Helliwell; Craig C Wood; Masumi Robertson; W James Peacock; Elizabeth S Dennis
Journal:  Plant J       Date:  2006-04       Impact factor: 6.417

Review 3.  Diversity of Polycomb group complexes in plants: same rules, different players?

Authors:  Lars Hennig; Maria Derkacheva
Journal:  Trends Genet       Date:  2009-08-27       Impact factor: 11.639

4.  early in short days 4, a mutation in Arabidopsis that causes early flowering and reduces the mRNA abundance of the floral repressor FLC.

Authors:  Paul H Reeves; Giovanni Murtas; Sudhansu Dash; George Coupland
Journal:  Development       Date:  2002-12       Impact factor: 6.868

5.  Analysis of naturally occurring late flowering in Arabidopsis thaliana.

Authors:  I Lee; A Bleecker; R Amasino
Journal:  Mol Gen Genet       Date:  1993-02

6.  The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors:  C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

7.  Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs.

Authors:  Shelley R Hepworth; Federico Valverde; Dean Ravenscroft; Aidyn Mouradov; George Coupland
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

8.  VERNALIZATION INSENSITIVE 3 (VIN3) is required for the response of Arabidopsis thaliana seedlings exposed to low oxygen conditions.

Authors:  Donna M Bond; Iain W Wilson; Elizabeth S Dennis; Barry J Pogson; E Jean Finnegan
Journal:  Plant J       Date:  2009-04-06       Impact factor: 6.417

9.  The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions.

Authors:  Abdelaty Saleh; Raul Alvarez-Venegas; Mehtap Yilmaz; Oahn Le; Guichuan Hou; Monther Sadder; Ayed Al-Abdallat; Yuannan Xia; Guoqinq Lu; Istvan Ladunga; Zoya Avramova
Journal:  Plant Cell       Date:  2008-03-28       Impact factor: 11.277

10.  Mapping FRI, a locus controlling flowering time and vernalization response in Arabidopsis thaliana.

Authors:  J H Clarke; C Dean
Journal:  Mol Gen Genet       Date:  1994-01
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  17 in total

1.  Effect of sowing dates and vernalization on Beta vulgaris L. cv. Univers C-leaf structure.

Authors:  Mohammed M Sakr; Omar A Almaghrabi
Journal:  Saudi J Biol Sci       Date:  2011-04-29       Impact factor: 4.219

Review 2.  Gene activation and cell fate control in plants: a chromatin perspective.

Authors:  Julia Engelhorn; Robert Blanvillain; Cristel C Carles
Journal:  Cell Mol Life Sci       Date:  2014-04-09       Impact factor: 9.261

3.  Vernalization-Triggered Intragenic Chromatin Loop Formation by Long Noncoding RNAs.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Dev Cell       Date:  2017-01-26       Impact factor: 12.270

4.  Natural variation in autumn expression is the major adaptive determinant distinguishing Arabidopsis FLC haplotypes.

Authors:  Jo Hepworth; Rea L Antoniou-Kourounioti; Kristina Berggren; Catja Selga; Eleri H Tudor; Bryony Yates; Deborah Cox; Barley Rose Collier Harris; Judith A Irwin; Martin Howard; Torbjörn Säll; Svante Holm; Caroline Dean
Journal:  Elife       Date:  2020-09-09       Impact factor: 8.140

5.  Coordination of the vernalization response through a VIN3 and FLC gene family regulatory network in Arabidopsis.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Plant Cell       Date:  2013-02-15       Impact factor: 11.277

6.  The two clock proteins CCA1 and LHY activate VIN3 transcription during vernalization through the vernalization-responsive cis-element.

Authors:  Jinseul Kyung; Myeongjune Jeon; Goowon Jeong; Yourae Shin; Eunjoo Seo; Jihyeon Yu; Hoyeun Kim; Chung-Mo Park; Daehee Hwang; Ilha Lee
Journal:  Plant Cell       Date:  2022-03-04       Impact factor: 11.277

7.  Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice.

Authors:  Tiantian Li; Xiangsong Chen; Xiaochao Zhong; Yu Zhao; Xiaoyun Liu; Shaoli Zhou; Saifeng Cheng; Dao-Xiu Zhou
Journal:  Plant Cell       Date:  2013-11-26       Impact factor: 11.277

8.  Sweet memories: epigenetic control in flowering.

Authors:  Ralf Müller; Justin Goodrich
Journal:  F1000 Biol Rep       Date:  2011-06-01

9.  Identification of DNA Methylation and Transcriptomic Profiles Associated With Fruit Mealiness in Prunus persica (L.) Batsch.

Authors:  Karin Rothkegel; Alonso Espinoza; Dayan Sanhueza; Victoria Lillo-Carmona; Aníbal Riveros; Reinaldo Campos-Vargas; Claudio Meneses
Journal:  Front Plant Sci       Date:  2021-06-10       Impact factor: 5.753

10.  Antagonistic roles of SEPALLATA3, FT and FLC genes as targets of the polycomb group gene CURLY LEAF.

Authors:  Manuel Lopez-Vernaza; Suxin Yang; Ralf Müller; Frazer Thorpe; Erica de Leau; Justin Goodrich
Journal:  PLoS One       Date:  2012-02-17       Impact factor: 3.240

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