Literature DB >> 17114233

Ion conduction through MscS as determined by electrophysiology and simulation.

Marcos Sotomayor1, Valeria Vásquez, Eduardo Perozo, Klaus Schulten.   

Abstract

The mechanosensitive channel of small conductance (MscS) is a membrane protein thought to act as a safety valve in bacteria, regulating the release of ions and small solutes when gated by membrane tension under challenging osmotic conditions. The influence of voltage on channel activation and the functional state depicted by the available crystal structure of MscS remain debated. Therefore, in an effort to relate electrophysiological measurements on MscS and properties of the MscS crystal conformation, we report here MscS's response to voltage and pressure as determined by patch-clamp experiments, as well as MscS electrostatics and transport properties as determined through all-atom molecular dynamics simulations of the protein embedded in a lipid bilayer, a 224,000-atom system. The experiments reveal that MscS is a slightly anion-selective channel with a conductance of approximately 1 ns, activated by pressure and inactivated in a voltage-dependent manner. On the other hand, the simulations, covering over 200 ns and including biasing electrostatic potentials, show that MscS restrained to the crystal conformation exhibits low conductance; unrestrained it increases the channel radius upon application of a large electrostatic bias and exhibits then ion conduction that matches experimentally determined conductances. The simulated conductance stems mainly from Cl- ions.

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Year:  2006        PMID: 17114233      PMCID: PMC1779981          DOI: 10.1529/biophysj.106.095232

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  64 in total

1.  Tests of continuum theories as models of ion channels. II. Poisson-Nernst-Planck theory versus brownian dynamics.

Authors:  B Corry; S Kuyucak; S H Chung
Journal:  Biophys J       Date:  2000-05       Impact factor: 4.033

2.  Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics.

Authors:  P S Crozier; D Henderson; R L Rowley; D D Busath
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Domain organization of the MscS mechanosensitive channel of Escherichia coli.

Authors:  Samantha Miller; Wendy Bartlett; Subramanian Chandrasekaran; Sally Simpson; Michelle Edwards; Ian R Booth
Journal:  EMBO J       Date:  2003-01-02       Impact factor: 11.598

4.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

5.  Common evolutionary origins of mechanosensitive ion channels in Archaea, Bacteria and cell-walled Eukarya.

Authors:  Anna Kloda; Boris Martinac
Journal:  Archaea       Date:  2002-03       Impact factor: 3.273

6.  Brownian dynamics investigation into the conductance state of the MscS channel crystal structure.

Authors:  Taira Vora; Ben Corry; Shin-Ho Chung
Journal:  Biochim Biophys Acta       Date:  2006-04-26

Review 7.  Two families of mechanosensitive channel proteins.

Authors:  Christopher D Pivetti; Ming-Ren Yen; Samantha Miller; Wolfgang Busch; Yi-Hsiung Tseng; Ian R Booth; Milton H Saier
Journal:  Microbiol Mol Biol Rev       Date:  2003-03       Impact factor: 11.056

8.  Pivotal role of the glycine-rich TM3 helix in gating the MscS mechanosensitive channel.

Authors:  Michelle D Edwards; Yuezhou Li; Sanguk Kim; Samantha Miller; Wendy Bartlett; Susan Black; Sally Dennison; Irene Iscla; Paul Blount; James U Bowie; Ian R Booth
Journal:  Nat Struct Mol Biol       Date:  2005-01-23       Impact factor: 15.369

9.  MscS-like proteins control plastid size and shape in Arabidopsis thaliana.

Authors:  Elizabeth S Haswell; Elliot M Meyerowitz
Journal:  Curr Biol       Date:  2006-01-10       Impact factor: 10.834

10.  Water dynamics and dewetting transitions in the small mechanosensitive channel MscS.

Authors:  Andriy Anishkin; Sergei Sukharev
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

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  65 in total

1.  Molecular dynamics simulations of lipid membrane electroporation.

Authors:  Lucie Delemotte; Mounir Tarek
Journal:  J Membr Biol       Date:  2012-05-30       Impact factor: 1.843

Review 2.  The MscS and MscL families of mechanosensitive channels act as microbial emergency release valves.

Authors:  Ian R Booth; Paul Blount
Journal:  J Bacteriol       Date:  2012-06-08       Impact factor: 3.490

3.  Tertiary and secondary structure elasticity of a six-Ig titin chain.

Authors:  Eric H Lee; Jen Hsin; Eleonore von Castelmur; Olga Mayans; Klaus Schulten
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

4.  Genetic screen for potassium leaky small mechanosensitive channels (MscS) in Escherichia coli: recognition of cytoplasmic β domain as a new gating element.

Authors:  Piotr Koprowski; Wojciech Grajkowski; Ehud Y Isacoff; Andrzej Kubalski
Journal:  J Biol Chem       Date:  2010-10-26       Impact factor: 5.157

5.  Deciphering ionic current signatures of DNA transport through a nanopore.

Authors:  Aleksei Aksimentiev
Journal:  Nanoscale       Date:  2010-02-02       Impact factor: 7.790

Review 6.  Constant electric field simulations of the membrane potential illustrated with simple systems.

Authors:  James Gumbart; Fatemeh Khalili-Araghi; Marcos Sotomayor; Benoît Roux
Journal:  Biochim Biophys Acta       Date:  2011-10-05

Review 7.  Mechanosensitive channels: what can they do and how do they do it?

Authors:  Elizabeth S Haswell; Rob Phillips; Douglas C Rees
Journal:  Structure       Date:  2011-10-12       Impact factor: 5.006

8.  Molecular control of ionic conduction in polymer nanopores.

Authors:  Eduardo R Cruz-Chu; Thorsten Ritz; Zuzanna S Siwy; Klaus Schulten
Journal:  Faraday Discuss       Date:  2009       Impact factor: 4.008

9.  Characterization of the resting MscS: modeling and analysis of the closed bacterial mechanosensitive channel of small conductance.

Authors:  Andriy Anishkin; Bradley Akitake; Sergei Sukharev
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

10.  Interaction between the cytoplasmic and transmembrane domains of the mechanosensitive channel MscS.

Authors:  Takeshi Nomura; Masahiro Sokabe; Kenjiro Yoshimura
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

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