Literature DB >> 17101447

Quantitative genetic analysis in Saccharomyces cerevisiae using epistatic miniarray profiles (E-MAPs) and its application to chromatin functions.

M Schuldiner1, S R Collins, J S Weissman, N J Krogan.   

Abstract

The use of the budding yeast Saccharomyces cerevisiae as a simple eukaryotic model system for the study of chromatin assembly and regulation has allowed rapid discovery of genes that influence this complex process. The functions of many of the proteins encoded by these genes have not yet been fully characterized. Here, we describe a high-throughput methodology that can be used to illuminate gene function and discuss its application to a set of genes involved in the creation, maintenance and remodeling of chromatin structure. Our technique, termed E-MAPs, involves the generation of quantitative genetic interaction maps that reveal the function and organization of cellular proteins and networks.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17101447     DOI: 10.1016/j.ymeth.2006.07.034

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  55 in total

Review 1.  Regulation of recombination and genomic maintenance.

Authors:  Wolf-Dietrich Heyer
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-03       Impact factor: 10.005

2.  CCR4/NOT complex associates with the proteasome and regulates histone methylation.

Authors:  R Nicholas Laribee; Yoichiro Shibata; Douglas P Mersman; Sean R Collins; Patrick Kemmeren; Assen Roguev; Jonathan S Weissman; Scott D Briggs; Nevan J Krogan; Brian D Strahl
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

3.  An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics.

Authors:  Luke A Selth; Yahli Lorch; Maria T Ocampo-Hafalla; Richard Mitter; Michael Shales; Nevan J Krogan; Roger D Kornberg; Jesper Q Svejstrup
Journal:  Mol Cell Biol       Date:  2009-05-26       Impact factor: 4.272

4.  Dynamic reprogramming of transcription factors to and from the subtelomere.

Authors:  H Craig Mak; Lorraine Pillus; Trey Ideker
Journal:  Genome Res       Date:  2009-04-16       Impact factor: 9.043

5.  Assembling global maps of cellular function through integrative analysis of physical and genetic networks.

Authors:  Rohith Srivas; Gregory Hannum; Johannes Ruscheinski; Keiichoro Ono; Peng-Liang Wang; Michael Smoot; Trey Ideker
Journal:  Nat Protoc       Date:  2011-08-11       Impact factor: 13.491

Review 6.  The small subunit processome in ribosome biogenesis—progress and prospects.

Authors:  Kathleen R Phipps; J Michael Charette; Susan J Baserga
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

7.  Key functional regions in the histone variant H2A.Z C-terminal docking domain.

Authors:  Alice Y Wang; Maria J Aristizabal; Colm Ryan; Nevan J Krogan; Michael S Kobor
Journal:  Mol Cell Biol       Date:  2011-07-26       Impact factor: 4.272

8.  Quantitative Yeast Genetic Interaction Profiling of Bacterial Effector Proteins Uncovers a Role for the Human Retromer in Salmonella Infection.

Authors:  Kristin L Patrick; Jason A Wojcechowskyj; Samantha L Bell; Morgan N Riba; Tao Jing; Sara Talmage; Pengbiao Xu; Ana L Cabello; Jiewei Xu; Michael Shales; David Jimenez-Morales; Thomas A Ficht; Paul de Figueiredo; James E Samuel; Pingwei Li; Nevan J Krogan; Robert O Watson
Journal:  Cell Syst       Date:  2018-08-01       Impact factor: 10.304

9.  Identification of yeast proteins necessary for cell-surface function of a potassium channel.

Authors:  Friederike A Haass; Martin Jonikas; Peter Walter; Jonathan S Weissman; Yuh-Nung Jan; Lily Y Jan; Maya Schuldiner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-07       Impact factor: 11.205

10.  Chaperone control of the activity and specificity of the histone H3 acetyltransferase Rtt109.

Authors:  Jeffrey Fillingham; Judith Recht; Andrea C Silva; Bernhard Suter; Andrew Emili; Igor Stagljar; Nevan J Krogan; C David Allis; Michael-Christopher Keogh; Jack F Greenblatt
Journal:  Mol Cell Biol       Date:  2008-05-05       Impact factor: 4.272

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.