Literature DB >> 17989219

Identification of yeast proteins necessary for cell-surface function of a potassium channel.

Friederike A Haass1, Martin Jonikas, Peter Walter, Jonathan S Weissman, Yuh-Nung Jan, Lily Y Jan, Maya Schuldiner.   

Abstract

Inwardly rectifying potassium (Kir) channels form gates in the cell membrane that regulate the flow of K(+) ions into and out of the cell, thereby influencing the membrane potential and electrical signaling of many cell types, including neurons and cardiomyocytes. Kir-channel function depends on other cellular proteins that aid in the folding of channel subunits, assembly into tetrameric complexes, trafficking of quality-controlled channels to the plasma membrane, and regulation of channel activity at the cell surface. We used the yeast Saccharomyces cerevisiae as a model system to identify proteins necessary for the functional expression of a mammalian Kir channel at the cell surface. A screen of 376 yeast strains, each lacking one nonessential protein localized to the early secretory pathway, identified seven deletion strains in which functional expression of the Kir channel at the plasma membrane was impaired. Six deletions were of genes with known functions in trafficking and lipid biosynthesis (sur4Delta, csg2Delta, erv14Delta, emp24Delta, erv25Delta, and bst1Delta), and one deletion was of an uncharacterized gene (yil039wDelta). We provide genetic and functional evidence that Yil039wp, a conserved, phosphoesterase domain-containing protein, which we named "trafficking of Emp24p/Erv25p-dependent cargo disrupted 1" (Ted1p), acts together with Emp24p/Erv25p in cargo exit from the endoplasmic reticulum (ER). The seven yeast proteins identified in our screen likely impact Kir-channel functional expression at the level of vesicle budding from the ER and/or the local lipid environment at the plasma membrane.

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Year:  2007        PMID: 17989219      PMCID: PMC2084299          DOI: 10.1073/pnas.0708765104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

Review 1.  Potassium channel ontogeny.

Authors:  Carol Deutsch
Journal:  Annu Rev Physiol       Date:  2002       Impact factor: 19.318

2.  Diverse trafficking patterns due to multiple traffic motifs in G protein-activated inwardly rectifying potassium channels from brain and heart.

Authors:  Dzwokai Ma; Noa Zerangue; Kimberly Raab-Graham; Sharon R Fried; Yuh Nung Jan; Lily Yeh Jan
Journal:  Neuron       Date:  2002-02-28       Impact factor: 17.173

Review 3.  ER transport signals and trafficking of potassium channels and receptors.

Authors:  Dzwokai Ma; Lily Yeh Jan
Journal:  Curr Opin Neurobiol       Date:  2002-06       Impact factor: 6.627

4.  Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications.

Authors:  C B Brachmann; A Davies; G J Cost; E Caputo; J Li; P Hieter; J D Boeke
Journal:  Yeast       Date:  1998-01-30       Impact factor: 3.239

5.  Functional differentiation and selective inactivation of multiple Saccharomyces cerevisiae genes involved in very-long-chain fatty acid synthesis.

Authors:  H Rössler; C Rieck; T Delong; U Hoja; E Schweizer
Journal:  Mol Genet Genomics       Date:  2003-03-26       Impact factor: 3.291

Review 6.  Kir channels in the CNS: emerging new roles and implications for neurological diseases.

Authors:  C Neusch; J H Weishaupt; M Bähr
Journal:  Cell Tissue Res       Date:  2003-02-04       Impact factor: 5.249

7.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

8.  Raft partitioning of the yeast uracil permease during trafficking along the endocytic pathway.

Authors:  Sophie Dupré; Rosine Haguenauer-Tsapis
Journal:  Traffic       Date:  2003-02       Impact factor: 6.215

9.  Lipids in the structure, folding, and function of the KcsA K+ channel.

Authors:  Francis I Valiyaveetil; Yufeng Zhou; Roderick MacKinnon
Journal:  Biochemistry       Date:  2002-09-03       Impact factor: 3.162

10.  Distinct retrieval and retention mechanisms are required for the quality control of endoplasmic reticulum protein folding.

Authors:  S Vashist; W Kim; W J Belden; E D Spear; C Barlowe; D T Ng
Journal:  J Cell Biol       Date:  2001-10-22       Impact factor: 10.539

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  21 in total

1.  Endoplasmic reticulum-associated degradation of the renal potassium channel, ROMK, leads to type II Bartter syndrome.

Authors:  Brighid M O'Donnell; Timothy D Mackie; Arohan R Subramanya; Jeffrey L Brodsky
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

2.  The endosomal trafficking factors CORVET and ESCRT suppress plasma membrane residence of the renal outer medullary potassium channel (ROMK).

Authors:  Timothy D Mackie; Bo-Young Kim; Arohan R Subramanya; Daniel J Bain; Allyson F O'Donnell; Paul A Welling; Jeffrey L Brodsky
Journal:  J Biol Chem       Date:  2018-01-08       Impact factor: 5.157

3.  Saccharomyces cerivisiae as a model system for kidney disease: what can yeast tell us about renal function?

Authors:  Alexander R Kolb; Teresa M Buck; Jeffrey L Brodsky
Journal:  Am J Physiol Renal Physiol       Date:  2011-04-13

4.  Genomewide analysis reveals novel pathways affecting endoplasmic reticulum homeostasis, protein modification and quality control.

Authors:  Alenka Copic; Mariana Dorrington; Silvere Pagant; Justine Barry; Marcus C S Lee; Indira Singh; John L Hartman; Elizabeth A Miller
Journal:  Genetics       Date:  2009-05-11       Impact factor: 4.562

5.  Expression of three topologically distinct membrane proteins elicits unique stress response pathways in the yeast Saccharomyces cerevisiae.

Authors:  Teresa M Buck; Rick Jordan; James Lyons-Weiler; Joshua L Adelman; Patrick G Needham; Thomas R Kleyman; Jeffrey L Brodsky
Journal:  Physiol Genomics       Date:  2015-03-10       Impact factor: 3.107

Review 6.  Cholesterol and ion channels.

Authors:  Irena Levitan; Yun Fang; Avia Rosenhouse-Dantsker; Victor Romanenko
Journal:  Subcell Biochem       Date:  2010

7.  Tamm-Horsfall glycoprotein interacts with renal outer medullary potassium channel ROMK2 and regulates its function.

Authors:  Aparna Renigunta; Vijay Renigunta; Turgay Saritas; Niels Decher; Kerim Mutig; Siegfried Waldegger
Journal:  J Biol Chem       Date:  2010-11-16       Impact factor: 5.157

Review 8.  Biosynthesis of GPI-anchored proteins: special emphasis on GPI lipid remodeling.

Authors:  Taroh Kinoshita; Morihisa Fujita
Journal:  J Lipid Res       Date:  2015-11-12       Impact factor: 5.922

Review 9.  Trafficking of glycosylphosphatidylinositol anchored proteins from the endoplasmic reticulum to the cell surface.

Authors:  Manuel Muñiz; Howard Riezman
Journal:  J Lipid Res       Date:  2015-10-08       Impact factor: 5.922

Review 10.  Cholesterol and Kir channels.

Authors:  Irena Levitan
Journal:  IUBMB Life       Date:  2009-08       Impact factor: 3.885

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