Literature DB >> 17060917

A new strategy for structure determination of large proteins in solution without deuteration.

Yingqi Xu1, Yu Zheng, Jing-Song Fan, Daiwen Yang.   

Abstract

So far high-resolution structure determination by nuclear magnetic resonance (NMR) spectroscopy has been limited to proteins <30 kDa, although global fold determination is possible for substantially larger proteins. Here we present a strategy for assigning backbone and side-chain resonances of large proteins without deuteration, with which one can obtain high-resolution structures from (1)H-(1)H distance restraints. The strategy uses information from through-bond correlation experiments to filter intraresidue and sequential correlations from through-space correlation experiments, and then matches the filtered correlations to obtain sequential assignment. We demonstrate this strategy on three proteins ranging from 24 to 65 kDa for resonance assignment and on maltose binding protein (42 kDa) and hemoglobin (65 kDa) for high-resolution structure determination. The strategy extends the size limit for structure determination by NMR spectroscopy to 42 kDa for monomeric proteins and to 65 kDa for differentially labeled multimeric proteins without the need for deuteration or selective labeling.

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Year:  2006        PMID: 17060917     DOI: 10.1038/nmeth938

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  41 in total

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Review 8.  High-resolution NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids.

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9.  Stable isotope labeling of protein by Kluyveromyces lactis for NMR study.

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10.  Methyl-detected 'out-and-back' NMR experiments for simultaneous assignments of Alabeta and Ilegamma2 methyl groups in large proteins.

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Journal:  J Biomol NMR       Date:  2009-03-10       Impact factor: 2.835

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