Literature DB >> 17057723

Using substrate engineering to harness enzymatic promiscuity and expand biological catalysis.

Luke L Lairson, Andrew G Watts, Warren W Wakarchuk, Stephen G Withers.   

Abstract

Despite their unparalleled catalytic prowess and environmental compatibility, enzymes have yet to see widespread application in synthetic chemistry. This lack of application and the resulting underuse of their enormous potential stems not only from a wariness about aqueous biological catalysis on the part of the typical synthetic chemist but also from limitations on enzyme applicability that arise from the high degree of substrate specificity possessed by most enzymes. This latter perceived limitation is being successfully challenged through rational protein engineering and directed evolution efforts to alter substrate specificity. However, such programs require considerable effort to establish. Here we report an alternative strategy for expanding the substrate specificity, and therefore the synthetic utility, of a given enzyme through a process of "substrate engineering". The attachment of a readily removable functional group to an alternative glycosyltransferase substrate induces a productive binding mode, facilitating rational control of substrate specificity and regioselectivity using wild-type enzymes.

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Year:  2006        PMID: 17057723     DOI: 10.1038/nchembio828

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  18 in total

1.  Highly efficient chemoenzymatic synthesis of beta1-4-linked galactosides with promiscuous bacterial beta1-4-galactosyltransferases.

Authors:  Kam Lau; Vireak Thon; Hai Yu; Li Ding; Yi Chen; Musleh M Muthana; Denton Wong; Ronald Huang; Xi Chen
Journal:  Chem Commun (Camb)       Date:  2010-07-12       Impact factor: 6.222

2.  A processive carbohydrate polymerase that mediates bifunctional catalysis using a single active site.

Authors:  John F May; Matthew R Levengood; Rebecca A Splain; Christopher D Brown; Laura L Kiessling
Journal:  Biochemistry       Date:  2012-02-03       Impact factor: 3.162

3.  Molecular basis for branched steviol glucoside biosynthesis.

Authors:  Soon Goo Lee; Eitan Salomon; Oliver Yu; Joseph M Jez
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-10       Impact factor: 11.205

4.  Redox-Controlled Site-Specific α2-6-Sialylation.

Authors:  Na Lu; Jinfeng Ye; Jiansong Cheng; Aniruddha Sasmal; Chang-Cheng Liu; Wenlong Yao; Jun Yan; Naazneen Khan; Wen Yi; Ajit Varki; Hongzhi Cao
Journal:  J Am Chem Soc       Date:  2019-03-11       Impact factor: 15.419

5.  Development of a universal glycosyltransferase assay amenable to high-throughput formats.

Authors:  Hyun Soo Lee; Jon S Thorson
Journal:  Anal Biochem       Date:  2011-07-08       Impact factor: 3.365

6.  Catalytic versus inhibitory promiscuity in cytochrome P450s: implications for evolution of new function.

Authors:  Robert S Foti; Mathew Honaker; Abhinav Nath; Josh T Pearson; Brian Buttrick; Nina Isoherranen; William M Atkins
Journal:  Biochemistry       Date:  2011-03-11       Impact factor: 3.162

7.  Engineering Kinases to Phosphorylate Nucleoside Analogs for Antiviral and Cancer Therapy.

Authors:  Stefan Lutz; Lingfeng Liu; Yichen Liu
Journal:  Chimia (Aarau)       Date:  2009-11-01       Impact factor: 1.509

8.  Selective oxidation of carbolide C-H bonds by an engineered macrolide P450 mono-oxygenase.

Authors:  Shengying Li; Mani Raj Chaulagain; Allison R Knauff; Larissa M Podust; John Montgomery; David H Sherman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-15       Impact factor: 11.205

9.  Multifunctionality of Campylobacter jejuni sialyltransferase CstII: characterization of GD3/GT3 oligosaccharide synthase, GD3 oligosaccharide sialidase, and trans-sialidase activities.

Authors:  Jiansong Cheng; Hai Yu; Kam Lau; Shengshu Huang; Harshal A Chokhawala; Yanhong Li; Vinod Kumar Tiwari; Xi Chen
Journal:  Glycobiology       Date:  2008-05-28       Impact factor: 4.313

10.  Directed evolution of an orthogonal nucleoside analog kinase via fluorescence-activated cell sorting.

Authors:  Lingfeng Liu; Yongfeng Li; Dennis Liotta; Stefan Lutz
Journal:  Nucleic Acids Res       Date:  2009-05-27       Impact factor: 16.971

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