Literature DB >> 19833867

Selective oxidation of carbolide C-H bonds by an engineered macrolide P450 mono-oxygenase.

Shengying Li1, Mani Raj Chaulagain, Allison R Knauff, Larissa M Podust, John Montgomery, David H Sherman.   

Abstract

Regio- and stereoselective oxidation of an unactivated C-H bond remains a central challenge in organic chemistry. Considerable effort has been devoted to identifying transition metal complexes, biological catalysts, or simplified mimics, but limited success has been achieved. Cytochrome P450 mono-oxygenases are involved in diverse types of regio- and stereoselective oxidations, and represent a promising biocatalyst to address this challenge. The application of this class of enzymes is particularly significant if their substrate spectra can be broadened, selectivity controlled, and reactions catalyzed in the absence of expensive heterologous redox partners. In this study, we engineered a macrolide biosynthetic P450 mono-oxygenase PikC (PikC(D50N)-RhFRED) with remarkable substrate flexibility, significantly increased activity compared to wild-type enzyme, and self-sufficiency. By harnessing its unique desosamine-anchoring functionality via a heretofore under-explored "substrate engineering" strategy, we demonstrated the ability of PikC to hydroxylate a series of carbocyclic rings linked to the desosamine glycoside via an acetal linkage (referred to as "carbolides") in a regioselective manner. Complementary analysis of a number of high-resolution enzyme-substrate cocrystal structures provided significant insights into the function of the aminosugar-derived anchoring group for control of reaction site selectivity. Moreover, unexpected biological activity of a select number of these carbolide systems revealed their potential as a previously unrecorded class of antibiotics.

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Year:  2009        PMID: 19833867      PMCID: PMC2774028          DOI: 10.1073/pnas.0907203106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

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2.  Late-stage intermolecular CH activation for lead diversification: a highly chemoselective oxyfunctionalization of the C-9 position of potent bryostatin analogues.

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Journal:  Annu Rev Pharmacol Toxicol       Date:  2005       Impact factor: 13.820

4.  Diversification of catalytic function in a synthetic family of chimeric cytochrome p450s.

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5.  Fancy footwork in the sequence space shuffle.

Authors:  Frances H Arnold
Journal:  Nat Biotechnol       Date:  2006-03       Impact factor: 54.908

6.  Remote oxidation of steroids by photolysis of attached benzophenone groups.

Authors:  R Breslow; S Baldwin; T Flechtner; P Kalicky; S Liu; W Washburn
Journal:  J Am Chem Soc       Date:  1973-05-16       Impact factor: 15.419

Review 7.  Understanding and exploiting C-H bond activation.

Authors:  Jay A Labinger; John E Bercaw
Journal:  Nature       Date:  2002-05-30       Impact factor: 49.962

8.  C-H bond functionalization in complex organic synthesis.

Authors:  Kamil Godula; Dalibor Sames
Journal:  Science       Date:  2006-04-07       Impact factor: 47.728

9.  Oxaziridine-mediated catalytic hydroxylation of unactivated 3 degrees C-H bonds using hydrogen peroxide.

Authors:  Benjamin H Brodsky; J Du Bois
Journal:  J Am Chem Soc       Date:  2005-11-09       Impact factor: 15.419

10.  High turnover remote catalytic oxygenation of alkyl groups: how steric exclusion of unbound substrate contributes to high molecular recognition selectivity.

Authors:  Siddhartha Das; Gary W Brudvig; Robert H Crabtree
Journal:  J Am Chem Soc       Date:  2008-01-16       Impact factor: 15.419

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  40 in total

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Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

2.  Discovery of potent parthenolide-based antileukemic agents enabled by late-stage P450-mediated C-H functionalization.

Authors:  Joshua N Kolev; Kristen M O'Dwyer; Craig T Jordan; Rudi Fasan
Journal:  ACS Chem Biol       Date:  2013-11-08       Impact factor: 5.100

3.  A new structural form in the SAM/metal-dependent o‑methyltransferase family: MycE from the mycinamicin biosynthetic pathway.

Authors:  David L Akey; Shengying Li; Jamie R Konwerski; Laura A Confer; Steffen M Bernard; Yojiro Anzai; Fumio Kato; David H Sherman; Janet L Smith
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Review 4.  Use of chemical auxiliaries to control p450 enzymes for predictable oxidations at unactivated C-h bonds of substrates.

Authors:  Karine Auclair; Vanja Polic
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

5.  Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system.

Authors:  Lei Du; Sheng Dong; Xingwang Zhang; Chengying Jiang; Jingfei Chen; Lishan Yao; Xiao Wang; Xiaobo Wan; Xi Liu; Xinquan Wang; Shaohua Huang; Qiu Cui; Yingang Feng; Shuang-Jiang Liu; Shengying Li
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-12       Impact factor: 11.205

6.  Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.

Authors:  Sean A Newmister; Kinshuk Raj Srivastava; Rosa V Espinoza; Kersti Caddell Haatveit; Yogan Khatri; Rachel M Martini; Marc Garcia-Borràs; Larissa M Podust; K N Houk; David H Sherman
Journal:  ACS Catal       Date:  2020-11-04       Impact factor: 13.084

7.  A high-throughput screen for the engineered production of β-lactam antibiotics.

Authors:  Ryan M Phelan; Benjamin J DiPardo; Craig A Townsend
Journal:  ACS Chem Biol       Date:  2012-03-19       Impact factor: 5.100

8.  Substrate recognition by the multifunctional cytochrome P450 MycG in mycinamicin hydroxylation and epoxidation reactions.

Authors:  Shengying Li; Drew R Tietz; Florentine U Rutaganira; Petrea M Kells; Yojiro Anzai; Fumio Kato; Thomas C Pochapsky; David H Sherman; Larissa M Podust
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

9.  Acyl-CoA subunit selectivity in the pikromycin polyketide synthase PikAIV: steady-state kinetics and active-site occupancy analysis by FTICR-MS.

Authors:  Shilah A Bonnett; Christopher M Rath; Abdur-Rafay Shareef; Joanna R Joels; Joseph A Chemler; Kristina Håkansson; Kevin Reynolds; David H Sherman
Journal:  Chem Biol       Date:  2011-09-23

10.  Nickel-Catalyzed Regiodivergent Approach to Macrolide Motifs.

Authors:  Abdur-Rafay Shareef; David H Sherman; John Montgomery
Journal:  Chem Sci       Date:  2011-12-06       Impact factor: 9.825

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