Literature DB >> 17021240

Phylogeny of acetate-utilizing microorganisms in soils along a nutrient gradient in the Florida Everglades.

Ashvini Chauhan1, Andrew Ogram.   

Abstract

The consumption of acetate in soils taken from a nutrient gradient in the northern Florida Everglades was studied by stable isotope probing. Bacterial and archaeal 16S rRNA gene clone libraries from eutrophic and oligotrophic soil microcosms strongly suggest that a significant amount of acetate is consumed by syntrophic acetate oxidation in nutrient-enriched soil.

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Year:  2006        PMID： 17021240      PMCID： PMC1610308          DOI： 10.1128/AEM.01030-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  27 in total

1.  Metabolism of benzoate, cyclohex-1-ene carboxylate, and cyclohexane carboxylate by "Syntrophus aciditrophicus" strain SB in syntrophic association with H(2)-using microorganisms.

Authors:  M S Elshahed; V K Bhupathiraju; N Q Wofford; M A Nanny; M J McInerney
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy.

Authors:  J R Cole; B Chai; T L Marsh; R J Farris; Q Wang; S A Kulam; S Chandra; D M McGarrell; T M Schmidt; G M Garrity; J M Tiedje
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing.

Authors:  E Gallagher; L McGuinness; C Phelps; L Y Young; L J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

4.  Anaerobic microflora of everglades sediments: effects of nutrients on population profiles and activities.

Authors:  H L Drake; N G Aumen; C Kuhner; C Wagner; A Griesshammer; M Schmittroth
Journal:  Appl Environ Microbiol       Date:  1996-02       Impact factor: 4.792

5.  Sulfate-Dependent Interspecies H(2) Transfer between Methanosarcina barkeri and Desulfovibrio vulgaris during Coculture Metabolism of Acetate or Methanol.

Authors:  T J Phelps; R Conrad; J G Zeikus
Journal:  Appl Environ Microbiol       Date:  1985-09       Impact factor: 4.792

6.  Competition between methanogenesis and quinone respiration for ecologically important substrates in anaerobic consortia.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-12-01       Impact factor: 4.194

7.  Characterization of long-chain fatty-acid-degrading syntrophic associations from a biodegraded oil reservoir.

Authors:  Agnès Grabowski; Denis Blanchet; Christian Jeanthon
Journal:  Res Microbiol       Date:  2005-08       Impact factor: 3.992

8.  Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil.

Authors:  David R Singleton; Sabrina N Powell; Ramiah Sangaiah; Avram Gold; Louise M Ball; Michael D Aitken
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

9.  Methanocalculus taiwanensis sp. nov., isolated from an estuarine environment.

Authors:  Mei-Chin Lai; Sheng-Chung Chen; Chin-Ming Shu; Ming-Shing Chiou; Chia-Chi Wang; Ming-Jen Chuang; Tong-Yung Hong; Chia-Chi Liu; Li-Jane Lai; Jack Jay Hua
Journal:  Int J Syst Evol Microbiol       Date:  2002-09       Impact factor: 2.747

10.  Syntrophus aciditrophicus sp. nov., a new anaerobic bacterium that degrades fatty acids and benzoate in syntrophic association with hydrogen-using microorganisms.

Authors:  B E Jackson; V K Bhupathiraju; R S Tanner; C R Woese; M J McInerney
Journal:  Arch Microbiol       Date:  1999-01       Impact factor: 2.552
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  14 in total

1.  Composition of methane-oxidizing bacterial communities as a function of nutrient loading in the Florida everglades.

Authors:  Ashvini Chauhan; Ashish Pathak; Andrew Ogram
Journal:  Microb Ecol       Date:  2012-04-29       Impact factor: 4.552

2.  Diversity of nifH genotypes in floating periphyton mats along a nutrient gradient in the Florida Everglades.

Authors:  Puja Jasrotia; Andrew Ogram
Journal:  Curr Microbiol       Date:  2008-03-07       Impact factor: 2.188

3.  Diversity of anaerobic microorganisms involved in long-chain fatty acid degradation in methanogenic sludges as revealed by RNA-based stable isotope probing.

Authors:  Masashi Hatamoto; Hiroyuki Imachi; Yuto Yashiro; Akiyoshi Ohashi; Hideki Harada
Journal:  Appl Environ Microbiol       Date:  2007-05-04       Impact factor: 4.792

4.  Detection of active butyrate-degrading microorganisms in methanogenic sludges by RNA-based stable isotope probing.

Authors:  Masashi Hatamoto; Hiroyuki Imachi; Yuto Yashiro; Akiyoshi Ohashi; Hideki Harada
Journal:  Appl Environ Microbiol       Date:  2008-04-11       Impact factor: 4.792

Review 5.  Syntrophy in anaerobic global carbon cycles.

Authors:  Michael J McInerney; Jessica R Sieber; Robert P Gunsalus
Journal:  Curr Opin Biotechnol       Date:  2009-11-10       Impact factor: 9.740

6.  Structure and function of methanogens along a short-term restoration chronosequence in the Florida Everglades.

Authors:  Jason M Smith; Hector Castro; Andrew Ogram
Journal:  Appl Environ Microbiol       Date:  2007-04-20       Impact factor: 4.792

7.  Impact of sideways and bottom-up control factors on bacterial community succession over a tidal cycle.

Authors:  Ashvini Chauhan; Jennifer Cherrier; Henry N Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-27       Impact factor: 11.205

8.  Constraint-based modeling analysis of the metabolism of two Pelobacter species.

Authors:  Jun Sun; Shelley A Haveman; Olivia Bui; Tom R Fahland; Derek R Lovley
Journal:  BMC Syst Biol       Date:  2010-12-23

9.  The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes.

Authors:  N D Gray; A Sherry; R J Grant; A K Rowan; C R J Hubert; C M Callbeck; C M Aitken; D M Jones; J J Adams; S R Larter; I M Head
Journal:  Environ Microbiol       Date:  2011-09-14       Impact factor: 5.491

10.  Sulfate-reducing microorganisms in wetlands - fameless actors in carbon cycling and climate change.

Authors:  Michael Pester; Klaus-Holger Knorr; Michael W Friedrich; Michael Wagner; Alexander Loy
Journal:  Front Microbiol       Date:  2012-02-28       Impact factor: 5.640
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