Literature DB >> 17008929

Asn- and Asp-mediated interactions between transmembrane helices during translocon-mediated membrane protein assembly.

Nadja M Meindl-Beinker1, Carolina Lundin, Ingmarie Nilsson, Stephen H White, Gunnar von Heijne.   

Abstract

Inter-helix hydrogen bonding involving asparagine (Asn, N), glutamine (Gln, Q), aspartic acid (Asp, D) or glutamic acid (Glu, E) can drive efficient di- or trimerization of transmembrane helices in detergent micelles and lipid bilayers. Likewise, Asn-Asn and Asp-Asp pairs can promote the formation of helical hairpins during translocon-mediated membrane protein assembly in the endoplasmic reticulum. By in vitro translation of model integral membrane protein constructs in the presence of rough microsomes, we show that Asn- or Asp-mediated interactions with a neighbouring transmembrane helix can enhance the membrane insertion efficiency of a marginally hydrophobic transmembrane segment. Our observations suggest that inter-helix hydrogen bonds can form during Sec61 translocon-assisted insertion and thus could be important for membrane protein assembly.

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Year:  2006        PMID: 17008929      PMCID: PMC1679787          DOI: 10.1038/sj.embor.7400818

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  24 in total

1.  Polar side chains drive the association of model transmembrane peptides.

Authors:  H Gratkowski; J D Lear; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  Integration of Shaker-type K+ channel, KAT1, into the endoplasmic reticulum membrane: synergistic insertion of voltage-sensing segments, S3-S4, and independent insertion of pore-forming segments, S5-P-S6.

Authors:  Yoko Sato; Masao Sakaguchi; Shinobu Goshima; Tatsunosuke Nakamura; Nobuyuki Uozumi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-26       Impact factor: 11.205

3.  Motifs of serine and threonine can drive association of transmembrane helices.

Authors:  Jessica P Dawson; Joshua S Weinger; Donald M Engelman
Journal:  J Mol Biol       Date:  2002-02-22       Impact factor: 5.469

Review 4.  Membrane protein assembly in vivo.

Authors:  Gunnar Von Heijne
Journal:  Adv Protein Chem       Date:  2003

5.  Interhelical hydrogen bonding drives strong interactions in membrane proteins.

Authors:  F X Zhou; M J Cocco; W P Russ; A T Brunger; D M Engelman
Journal:  Nat Struct Biol       Date:  2000-02

6.  Cooperation of transmembrane segments during the integration of a double-spanning protein into the ER membrane.

Authors:  Sven U Heinrich; Tom A Rapoport
Journal:  EMBO J       Date:  2003-07-15       Impact factor: 11.598

Review 7.  Sequence motifs, polar interactions and conformational changes in helical membrane proteins.

Authors:  A Rachael Curran; Donald M Engelman
Journal:  Curr Opin Struct Biol       Date:  2003-08       Impact factor: 6.809

8.  Structure of the E. coli protein-conducting channel bound to a translating ribosome.

Authors:  Kakoli Mitra; Christiane Schaffitzel; Tanvir Shaikh; Florence Tama; Simon Jenni; Charles L Brooks; Nenad Ban; Joachim Frank
Journal:  Nature       Date:  2005-11-17       Impact factor: 49.962

9.  Polar residues drive association of polyleucine transmembrane helices.

Authors:  F X Zhou; H J Merianos; A T Brunger; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

10.  Sequence context strongly modulates association of polar residues in transmembrane helices.

Authors:  Jessica P Dawson; Roman A Melnyk; Charles M Deber; Donald M Engelman
Journal:  J Mol Biol       Date:  2003-08-01       Impact factor: 5.469

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  37 in total

1.  On the energetics of translocon-assisted insertion of charged transmembrane helices into membranes.

Authors:  Anna Rychkova; Spyridon Vicatos; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

2.  Contribution of positively charged flanking residues to the insertion of transmembrane helices into the endoplasmic reticulum.

Authors:  Mirjam Lerch-Bader; Carolina Lundin; Hyun Kim; Ingmarie Nilsson; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-07       Impact factor: 11.205

3.  Mechanism and hydrophobic forces driving membrane protein insertion of subunit II of cytochrome bo 3 oxidase.

Authors:  Nil Celebi; Ross E Dalbey; Jijun Yuan
Journal:  J Mol Biol       Date:  2007-11-22       Impact factor: 5.469

4.  Beta-barrel proteins that reside in the Escherichia coli outer membrane in vivo demonstrate varied folding behavior in vitro.

Authors:  Nancy K Burgess; Thuy P Dao; Ann Marie Stanley; Karen G Fleming
Journal:  J Biol Chem       Date:  2008-07-19       Impact factor: 5.157

5.  Cotranslational folding of membrane proteins probed by arrest-peptide-mediated force measurements.

Authors:  Florian Cymer; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

6.  Contribution of Cotranslational Folding Defects to Membrane Protein Homeostasis.

Authors:  Francis J Roushar; Timothy C Gruenhagen; Wesley D Penn; Bian Li; Jens Meiler; Beata Jastrzebska; Jonathan P Schlebach
Journal:  J Am Chem Soc       Date:  2018-12-26       Impact factor: 15.419

7.  Insertion of short transmembrane helices by the Sec61 translocon.

Authors:  Simon Jaud; Mónica Fernández-Vidal; Ingmarie Nilsson; Nadja M Meindl-Beinker; Nadja C Hübner; Douglas J Tobias; Gunnar von Heijne; Stephen H White
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-06       Impact factor: 11.205

8.  Molecular code for protein insertion in the endoplasmic reticulum membrane is similar for N(in)-C(out) and N(out)-C(in) transmembrane helices.

Authors:  Carolina Lundin; Hyun Kim; IngMarie Nilsson; Stephen H White; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-07       Impact factor: 11.205

9.  Binding-induced folding of prokaryotic ubiquitin-like protein on the Mycobacterium proteasomal ATPase targets substrates for degradation.

Authors:  Tao Wang; K Heran Darwin; Huilin Li
Journal:  Nat Struct Mol Biol       Date:  2010-10-17       Impact factor: 15.369

10.  Topological analysis of a haloacid permease of a Burkholderia sp. bacterium with a PhoA-LacZ reporter.

Authors:  Yuk Man Tse; Manda Yu; Jimmy S H Tsang
Journal:  BMC Microbiol       Date:  2009-10-31       Impact factor: 3.605

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