Literature DB >> 11226225

Polar residues drive association of polyleucine transmembrane helices.

F X Zhou1, H J Merianos, A T Brunger, D M Engelman.   

Abstract

Although many polar residues are directly involved in transmembrane protein functions, the extent to which they contribute to more general structural features is still unclear. Previous studies have demonstrated that asparagine residues can drive transmembrane helix association through interhelical hydrogen bonding [Choma, C., Gratkowski, H., Lear, J. D. & DeGrado, W. F. (2000) Nat. Struct. Biol. 7, 161-166; and Zhou, F. X., Cocco, M. J., Russ, W. P., Brunger, A. T. & Engelman, D. M. (2000) Nat. Struct. Biol. 7, 154-160]. We have studied the ability of other polar residues to promote helix association in detergent micelles and in biological membranes. Our results show that polyleucine sequences with Asn, Asp, Gln, Glu, and His, residues capable of being simultaneously hydrogen bond donors and acceptors, form homo- or heterooligomers. In contrast, polyleucine sequences with Ser, Thr, and Tyr do not associate more than the polyleucine sequence alone. The results therefore provide experimental evidence that interactions between polar residues in the helices of transmembrane proteins may serve to provide structural stability and oligomerization specificity. Furthermore, such interactions can allow structural flexibility required for the function of some membrane proteins.

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Year:  2001        PMID: 11226225      PMCID: PMC30124          DOI: 10.1073/pnas.041593698

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

1.  Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3Å resolution.

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Journal:  Nature       Date:  1985 Dec 19-1986 Jan 1       Impact factor: 49.962

2.  The effect of point mutations on the free energy of transmembrane alpha-helix dimerization.

Authors:  K G Fleming; A L Ackerman; D M Engelman
Journal:  J Mol Biol       Date:  1997-09-19       Impact factor: 5.469

3.  Non-random distribution of amino acids in the transmembrane segments of human type I single span membrane proteins.

Authors:  C Landolt-Marticorena; K A Williams; C M Deber; R A Reithmeier
Journal:  J Mol Biol       Date:  1993-02-05       Impact factor: 5.469

4.  Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.

Authors:  S Iwata; C Ostermeier; B Ludwig; H Michel
Journal:  Nature       Date:  1995-08-24       Impact factor: 49.962

5.  Atomic model of plant light-harvesting complex by electron crystallography.

Authors:  W Kühlbrandt; D N Wang; Y Fujiyoshi
Journal:  Nature       Date:  1994-02-17       Impact factor: 49.962

6.  A mutation data matrix for transmembrane proteins.

Authors:  D T Jones; W R Taylor; J M Thornton
Journal:  FEBS Lett       Date:  1994-02-21       Impact factor: 4.124

7.  Electrostatic interactions between transmembrane segments mediate folding of Shaker K+ channel subunits.

Authors:  S K Tiwari-Woodruff; C T Schulteis; A F Mock; D M Papazian
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

8.  The transmembrane 7-alpha-bundle of rhodopsin: distance geometry calculations with hydrogen bonding constraints.

Authors:  I D Pogozheva; A L Lomize; H I Mosberg
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

9.  Strong hydrogen bonding interactions involving a buried glutamic acid in the transmembrane sequence of the neu/erbB-2 receptor.

Authors:  S O Smith; C S Smith; B J Bormann
Journal:  Nat Struct Biol       Date:  1996-03

10.  Coassembly of synthetic segments of shaker K+ channel within phospholipid membranes.

Authors:  H Peled-Zehavi; I T Arkin; D M Engelman; Y Shai
Journal:  Biochemistry       Date:  1996-05-28       Impact factor: 3.162

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  119 in total

1.  Specificity in transmembrane helix-helix interactions can define a hierarchy of stability for sequence variants.

Authors:  K G Fleming; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

2.  The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions.

Authors:  A Senes; I Ubarretxena-Belandia; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

3.  Comparison of helix interactions in membrane and soluble alpha-bundle proteins.

Authors:  Markus Eilers; Ashish B Patel; Wei Liu; Steven O Smith
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

4.  Sequence determinants of the energetics of folding of a transmembrane four-helix-bundle protein.

Authors:  Kathleen P Howard; James D Lear; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-25       Impact factor: 11.205

Review 5.  Understanding the biogenesis of polytopic integral membrane proteins.

Authors:  R J Turner
Journal:  J Membr Biol       Date:  2003-04-01       Impact factor: 1.843

6.  Membrane peptides and their role in protobiological evolution.

Authors:  Andrew Pohorille; Michael A Wilson; Christophe Chipot
Journal:  Orig Life Evol Biosph       Date:  2003-04       Impact factor: 1.950

Review 7.  How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles.

Authors:  William F DeGrado; Holly Gratkowski; James D Lear
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

8.  Quantification of helix-helix binding affinities in micelles and lipid bilayers.

Authors:  Andrei L Lomize; I D Pogozheva; H I Mosberg
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

9.  β-Subunit of the Ostα-Ostβ organic solute transporter is required not only for heterodimerization and trafficking but also for function.

Authors:  Whitney V Christian; Na Li; Patricia M Hinkle; Nazzareno Ballatori
Journal:  J Biol Chem       Date:  2012-04-25       Impact factor: 5.157

10.  The control of transmembrane helix transverse position in membranes by hydrophilic residues.

Authors:  Shyam S Krishnakumar; Erwin London
Journal:  J Mol Biol       Date:  2007-10-17       Impact factor: 5.469

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