Literature DB >> 18072505

Automated volume analysis of head and neck lesions on CT scans using 3D level set segmentation.

Ethan Street1, Lubomir Hadjiiski, Berkman Sahiner, Sachin Gujar, Mohannad Ibrahim, Suresh K Mukherji, Heang-Ping Chan.   

Abstract

The authors have developed a semiautomatic system for segmentation of a diverse set of lesions in head and neck CT scans. The system takes as input an approximate bounding box, and uses a multistage level set to perform the final segmentation. A data set consisting of 69 lesions marked on 33 scans from 23 patients was used to evaluate the performance of the system. The contours from automatic segmentation were compared to both 2D and 3D gold standard contours manually drawn by three experienced radiologists. Three performance metric measures were used for the comparison. In addition, a radiologist provided quality ratings on a 1 to 10 scale for all of the automatic segmentations. For this pilot study, the authors observed that the differences between the automatic and gold standard contours were larger than the interobserver differences. However, the system performed comparably to the radiologists, achieving an average area intersection ratio of 85.4% compared to an average of 91.2% between two radiologists. The average absolute area error was 21.1% compared to 10.8%, and the average 2D distance was 1.38 mm compared to 0.84 mm between the radiologists. In addition, the quality rating data showed that, despite the very lax assumptions made on the lesion characteristics in designing the system, the automatic contours approximated many of the lesions very well.

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Year:  2007        PMID: 18072505      PMCID: PMC2742211          DOI: 10.1118/1.2794174

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  17 in total

1.  Computer-aided characterization of mammographic masses: accuracy of mass segmentation and its effects on characterization.

Authors:  B Sahiner; N Petrick; H P Chan; L M Hadjiiski; C Paramagul; M A Helvie; M N Gurcan
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

2.  Segmentation of breast tumor in three-dimensional ultrasound images using three-dimensional discrete active contour model.

Authors:  Ruey Feng Chang; Wen Jie Wu; Woo Kyung Moon; Wei Ming Chen; Wei Lee; Dar Ren Chen
Journal:  Ultrasound Med Biol       Date:  2003-11       Impact factor: 2.998

3.  3-D breast ultrasound segmentation using active contour model.

Authors:  Dar-Ren Chen; Ruey-Feng Chang; Wen-Jie Wu; Woo Kyung Moon; Wen-Lin Wu
Journal:  Ultrasound Med Biol       Date:  2003-07       Impact factor: 2.998

4.  Computerized characterization of breast masses on three-dimensional ultrasound volumes.

Authors:  Berkman Sahiner; Heang-Ping Chan; Marilyn A Roubidoux; Mark A Helvie; Lubomir M Hadjiiski; Aditya Ramachandran; Chintana Paramagul; Gerald L LeCarpentier; Alexis Nees; Caroline Blane
Journal:  Med Phys       Date:  2004-04       Impact factor: 4.071

5.  GIST: an interactive, GPU-based level set segmentation tool for 3D medical images.

Authors:  Joshua E Cates; Aaron E Lefohn; Ross T Whitaker
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

6.  A fuzzy c-means (FCM)-based approach for computerized segmentation of breast lesions in dynamic contrast-enhanced MR images.

Authors:  Weijie Chen; Maryellen L Giger; Ulrich Bick
Journal:  Acad Radiol       Date:  2006-01       Impact factor: 3.173

7.  Robust active appearance models and their application to medical image analysis.

Authors:  Reinhard Beichel; Horst Bischof; Franz Leberl; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2005-09       Impact factor: 10.048

8.  An adaptive level set method for interactive segmentation of intracranial tumors.

Authors:  Marc Droske; Bernhard Meyer; Martin Rumpf; Carlo Schaller
Journal:  Neurol Res       Date:  2005-06       Impact factor: 2.448

9.  Reliability analysis of the rank transform for stereo matching.

Authors:  J Banks; M Bennamoun
Journal:  IEEE Trans Syst Man Cybern B Cybern       Date:  2001

10.  Segmentation of focal cortical dysplasia lesions on MRI using level set evolution.

Authors:  O Colliot; T Mansi; N Bernasconi; V Naessens; D Klironomos; A Bernasconi
Journal:  Neuroimage       Date:  2006-08-02       Impact factor: 6.556

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  21 in total

1.  Characterization of mammographic masses based on level set segmentation with new image features and patient information.

Authors:  Jiazheng Shi; Berkman Sahiner; Heang-Ping Chan; Jun Ge; Lubomir Hadjiiski; Mark A Helvie; Alexis Nees; Yi-Ta Wu; Jun Wei; Chuan Zhou; Yiheng Zhang; Jing Cui
Journal:  Med Phys       Date:  2008-01       Impact factor: 4.071

2.  Does running cause metatarsophalangeal joint effusions? A comparison of synovial fluid volumes on MRI in athletes before and after running.

Authors:  Amy-Rose Kingston; Andoni P Toms; Subhadip Ghosh-Ray; Shelley Johnston-Downing
Journal:  Skeletal Radiol       Date:  2009-01-30       Impact factor: 2.199

Review 3.  Anniversary paper: History and status of CAD and quantitative image analysis: the role of Medical Physics and AAPM.

Authors:  Maryellen L Giger; Heang-Ping Chan; John Boone
Journal:  Med Phys       Date:  2008-12       Impact factor: 4.071

4.  Urinary bladder segmentation in CT urography (CTU) using CLASS.

Authors:  Lubomir Hadjiiski; Heang-Ping Chan; Richard H Cohan; Elaine M Caoili; Yuen Law; Kenny Cha; Chuan Zhou; Jun Wei
Journal:  Med Phys       Date:  2013-11       Impact factor: 4.071

5.  Computer input devices: neutral party or source of significant error in manual lesion segmentation?

Authors:  James Y Chen; F Jacob Seagull; Paul Nagy; Paras Lakhani; Elias R Melhem; Eliot L Siegel; Nabile M Safdar
Journal:  J Digit Imaging       Date:  2011-02       Impact factor: 4.056

6.  Detection of urinary bladder mass in CT urography with SPAN.

Authors:  Kenny Cha; Lubomir Hadjiiski; Heang-Ping Chan; Richard H Cohan; Elaine M Caoili; Chuan Zhou
Journal:  Med Phys       Date:  2015-07       Impact factor: 4.071

7.  Assessment of DICOM Viewers Capable of Loading Patient-specific 3D Models Obtained by Different Segmentation Platforms in the Operating Room.

Authors:  Giuseppe Lo Presti; Marina Carbone; Damiano Ciriaci; Daniele Aramini; Mauro Ferrari; Vincenzo Ferrari
Journal:  J Digit Imaging       Date:  2015-10       Impact factor: 4.056

8.  Hierarchical Vertex Regression-Based Segmentation of Head and Neck CT Images for Radiotherapy Planning.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2018-02       Impact factor: 10.856

9.  CT urography: segmentation of urinary bladder using CLASS with local contour refinement.

Authors:  Kenny Cha; Lubomir Hadjiiski; Heang-Ping Chan; Elaine M Caoili; Richard H Cohan; Chuan Zhou
Journal:  Phys Med Biol       Date:  2014-05-07       Impact factor: 3.609

10.  Unified wavelet and Gaussian filtering for segmentation of CT images; application in segmentation of bone in pelvic CT images.

Authors:  Simina Vasilache; Kevin Ward; Charles Cockrell; Jonathan Ha; Kayvan Najarian
Journal:  BMC Med Inform Decis Mak       Date:  2009-11-03       Impact factor: 2.796

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