Literature DB >> 16889413

NMR metabolic profiling of Aspergillus nidulans to monitor drug and protein activity.

Paxton Forgue1, Steven Halouska, Mark Werth, Kaimei Xu, Steve Harris, Robert Powers.   

Abstract

We describe a general protocol for using comparative NMR metabolomics data to infer in vivo efficacy, specificity and toxicity of chemical leads within a drug discovery program. The methodology is demonstrated using Aspergillus nidulans to monitor the activity of urate oxidase and orotidine-5'-phosphate decarboxylase and the impact of 8-azaxanthine, an inhibitor of urate oxidase. 8-azaxanthine is shown to inhibit A. nidulans hyphal growth by in vivo inactivation of urate oxidase.

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Year:  2006        PMID: 16889413     DOI: 10.1021/pr060114v

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  13 in total

1.  Advances in Nuclear Magnetic Resonance for Drug Discovery.

Authors:  Robert Powers
Journal:  Expert Opin Drug Discov       Date:  2009-10-01       Impact factor: 6.098

2.  NMR Metabolomics Protocols for Drug Discovery.

Authors:  Fatema Bhinderwala; Robert Powers
Journal:  Methods Mol Biol       Date:  2019

Review 3.  Analysis of bacterial biofilms using NMR-based metabolomics.

Authors:  Bo Zhang; Robert Powers
Journal:  Future Med Chem       Date:  2012-06       Impact factor: 3.808

Review 4.  The future of NMR-based metabolomics.

Authors:  John L Markley; Rafael Brüschweiler; Arthur S Edison; Hamid R Eghbalnia; Robert Powers; Daniel Raftery; David S Wishart
Journal:  Curr Opin Biotechnol       Date:  2016-08-28       Impact factor: 9.740

5.  Sample preparation of Mycobacterium tuberculosis extracts for nuclear magnetic resonance metabolomic studies.

Authors:  Denise K Zinniel; Robert J Fenton; Steven Halouska; Robert Powers; Raul G Barletta
Journal:  J Vis Exp       Date:  2012-09-03       Impact factor: 1.355

6.  Using NMR metabolomics to investigate tricarboxylic acid cycle-dependent signal transduction in Staphylococcus epidermidis.

Authors:  Marat R Sadykov; Bo Zhang; Steven Halouska; Jennifer L Nelson; Lauren W Kreimer; Yefei Zhu; Robert Powers; Greg A Somerville
Journal:  J Biol Chem       Date:  2010-09-22       Impact factor: 5.157

7.  Analysis of metabolomic PCA data using tree diagrams.

Authors:  Mark T Werth; Steven Halouska; Matthew D Shortridge; Bo Zhang; Robert Powers
Journal:  Anal Biochem       Date:  2009-12-21       Impact factor: 3.365

8.  Revisiting Protocols for the NMR Analysis of Bacterial Metabolomes.

Authors:  Steven Halouska; Bo Zhang; Rosmarie Gaupp; Shulei Lei; Emily Snell; Robert J Fenton; Raul G Barletta; Greg A Somerville; Robert Powers
Journal:  J Integr OMICS       Date:  2013-12

9.  NMR analysis of a stress response metabolic signaling network.

Authors:  Bo Zhang; Steven Halouska; Charles E Schiaffo; Marat R Sadykov; Greg A Somerville; Robert Powers
Journal:  J Proteome Res       Date:  2011-07-08       Impact factor: 4.466

10.  Use of NMR metabolomics to analyze the targets of D-cycloserine in mycobacteria: role of D-alanine racemase.

Authors:  Steven Halouska; Ofelia Chacon; Robert J Fenton; Denise K Zinniel; Raul G Barletta; Robert Powers
Journal:  J Proteome Res       Date:  2007-11-03       Impact factor: 4.466

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