Literature DB >> 16852614

When light falls in LOV: a quantum mechanical/molecular mechanical study of photoexcitation in Phot-LOV1 of Chlamydomonas reinhardtii.

Markus Dittrich1, Peter L Freddolino, Klaus Schulten.   

Abstract

Plants use sophisticated photosensing mechanisms to maximize their utilization of the available sunlight and to control developmental processes. The plant blue-light receptors of the Phot family mediate plant phototropism and contain two light, oxygen, and voltage (LOV)-sensitive domains as photoactive elements. Here, we report combined quantum mechanical/molecular mechanical simulations of the photocycle of a complete Phot-LOV1 domain from Chlamydomonas reinhardtii. We have investigated the electronic properties and structural changes that follow blue-light absorption. This permitted us to characterize the pathway for flavin-cysteinyl adduct formation, which was found to proceed via a neutral radical state generated by hydrogen atom transfer from the reactive cysteine residue, Cys57, to the chromophore flavin mononucleotide. Interestingly, we find that adduct formation does not cause any larger scale conformational changes in Phot-LOV1, which suggests that dynamic effects mediate signal transmission following the initial photoexcitation event.

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Year:  2005        PMID: 16852614      PMCID: PMC2453334          DOI: 10.1021/jp050943o

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  32 in total

Review 1.  Photoreceptors in plant photomorphogenesis to date. Five phytochromes, two cryptochromes, one phototropin, and one superchrome.

Authors:  W R Briggs; M A Olney
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

2.  A molecular dynamics simulation of the flavin mononucleotide-RNA aptamer complex.

Authors:  C Schneider; J Sühnel
Journal:  Biopolymers       Date:  1999-09       Impact factor: 2.505

Review 3.  Phototropins 1 and 2: versatile plant blue-light receptors.

Authors:  Winslow R Briggs; John M Christie
Journal:  Trends Plant Sci       Date:  2002-05       Impact factor: 18.313

4.  The LOV domain family: photoresponsive signaling modules coupled to diverse output domains.

Authors:  Sean Crosson; Sudarshan Rajagopal; Keith Moffat
Journal:  Biochemistry       Date:  2003-01-14       Impact factor: 3.162

5.  Ab initio quantum chemical investigation of the first steps of the photocycle of phototropin: a model study.

Authors:  Christian Neiss; Peter Saalfrank
Journal:  Photochem Photobiol       Date:  2003-01       Impact factor: 3.421

6.  Listening to the blue: the time-resolved thermodynamics of the bacterial blue-light receptor YtvA and its isolated LOV domain.

Authors:  Aba Losi; Benjamin Quest; Wolfgang Gärtner
Journal:  Photochem Photobiol Sci       Date:  2003-07       Impact factor: 3.982

7.  The photocycle of a flavin-binding domain of the blue light photoreceptor phototropin.

Authors:  T E Swartz; S B Corchnoy; J M Christie; J W Lewis; I Szundi; W R Briggs; R A Bogomolni
Journal:  J Biol Chem       Date:  2001-07-06       Impact factor: 5.157

8.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

9.  Phot1 and phot2 mediate blue light regulation of stomatal opening.

Authors:  T Kinoshita; M Doi; N Suetsugu; T Kagawa; M Wada; K Shimazaki
Journal:  Nature       Date:  2001-12-06       Impact factor: 49.962

10.  On the reaction mechanism of adduct formation in LOV domains of the plant blue-light receptor phototropin.

Authors:  Erik Schleicher; Radoslaw M Kowalczyk; Christopher W M Kay; Peter Hegemann; Adelbert Bacher; Markus Fischer; Robert Bittl; Gerald Richter; Stefan Weber
Journal:  J Am Chem Soc       Date:  2004-09-08       Impact factor: 15.419

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  21 in total

1.  Effect of computational methodology on the conformational dynamics of the protein photosensor LOV1 from Chlamydomonas reinhardtii.

Authors:  Emanuel Peter; Bernhard Dick; Stephan A Baeurle
Journal:  J Chem Biol       Date:  2011-03-11

2.  Dynamic switching mechanisms in LOV1 and LOV2 domains of plant phototropins.

Authors:  Peter L Freddolino; Markus Dittrich; Klaus Schulten
Journal:  Biophys J       Date:  2006-08-25       Impact factor: 4.033

3.  Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

Authors:  Maxime T A Alexandre; Tatiana Domratcheva; Cosimo Bonetti; Luuk J G W van Wilderen; Rienk van Grondelle; Marie-Louise Groot; Klaas J Hellingwerf; John T M Kennis
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

4.  Signals of LOV1: a computer simulation study on the wildtype LOV1-domain of Chlamydomonas reinhardtii and its mutants.

Authors:  Emanuel Peter; Bernhard Dick; Stephan A Baeurle
Journal:  J Mol Model       Date:  2011-07-15       Impact factor: 1.810

5.  The primary photophysics of the Avena sativa phototropin 1 LOV2 domain observed with time-resolved emission spectroscopy.

Authors:  Ivo H M van Stokkum; Magdalena Gauden; Sean Crosson; Rienk van Grondelle; Keith Moffat; John T M Kennis
Journal:  Photochem Photobiol       Date:  2011-02-22       Impact factor: 3.421

Review 6.  Tripping the light fantastic: blue-light photoreceptors as examples of environmentally modulated protein-protein interactions.

Authors:  Brian D Zoltowski; Kevin H Gardner
Journal:  Biochemistry       Date:  2010-12-14       Impact factor: 3.162

7.  Modulating LOV domain photodynamics with a residue alteration outside the chromophore binding site.

Authors:  Sang-Hun Song; Peter L Freddolino; Abigail I Nash; Elizabeth C Carroll; Klaus Schulten; Kevin H Gardner; Delmar S Larsen
Journal:  Biochemistry       Date:  2011-03-01       Impact factor: 3.162

8.  Mechanism-based tuning of a LOV domain photoreceptor.

Authors:  Brian D Zoltowski; Brian Vaccaro; Brian R Crane
Journal:  Nat Chem Biol       Date:  2009-08-30       Impact factor: 15.040

9.  Decrypting cryptochrome: revealing the molecular identity of the photoactivation reaction.

Authors:  Ilia A Solov'yov; Tatiana Domratcheva; Abdul Rehaman Moughal Shahi; Klaus Schulten
Journal:  J Am Chem Soc       Date:  2012-10-19       Impact factor: 15.419

10.  Signaling mechanisms of LOV domains: new insights from molecular dynamics studies.

Authors:  Peter L Freddolino; Kevin H Gardner; Klaus Schulten
Journal:  Photochem Photobiol Sci       Date:  2013-07       Impact factor: 3.982

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