Literature DB >> 16799461

Broadening of DNA replication origin usage during metazoan cell differentiation.

Sébastien Dazy1, Olivier Gandrillon, Olivier Hyrien, Marie-Noëlle Prioleau.   

Abstract

We have examined whether replication of the chicken beta-globin locus changes during differentiation of primary erythroid progenitors into erythrocytes. In undifferentiated progenitors, four principal initiation sites and a replication fork pausing region (RFP) were observed. Forty-eight hours after induction of differentiation, the principal sites were maintained, even in the activated beta(A)-globin gene, some minor sites were enhanced, three new sites appeared and the RFP disappeared. One of the activated origins showed increased histone H3 K9K14 diacetylation, but the others did not. These results demonstrate a broadening of DNA replication origin usage during differentiation of untransformed metazoan cells and indicate that histone H3 diacetylation, other histone modifications so far reported and transcription are not crucial determinants of origin selection in this system.

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Year:  2006        PMID: 16799461      PMCID: PMC1525144          DOI: 10.1038/sj.embor.7400736

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  22 in total

1.  Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci.

Authors:  M D Litt; M Simpson; F Recillas-Targa; M N Prioleau; G Felsenfeld
Journal:  EMBO J       Date:  2001-05-01       Impact factor: 11.598

2.  Coordination of replication and transcription along a Drosophila chromosome.

Authors:  David M MacAlpine; Heather K Rodríguez; Stephen P Bell
Journal:  Genes Dev       Date:  2004-12-15       Impact factor: 11.361

3.  Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development.

Authors:  Paolo Norio; Settapong Kosiyatrakul; Qiaoxin Yang; Zeqiang Guan; Nicholas M Brown; Sharon Thomas; Roy Riblet; Carl L Schildkraut
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

4.  Specific signals at the 3' end of the DHFR gene define one boundary of the downstream origin of replication.

Authors:  Larry D Mesner; Joyce L Hamlin
Journal:  Genes Dev       Date:  2005-05-01       Impact factor: 11.361

Review 5.  Origins go plastic.

Authors:  David M Gilbert
Journal:  Mol Cell       Date:  2005-12-09       Impact factor: 17.970

6.  Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions.

Authors:  Mirit I Aladjem; Luo Wei Rodewald; Chii Mai Lin; Sarah Bowman; Daniel M Cimbora; Linnea L Brody; Elliot M Epner; Mark Groudine; Geoffrey M Wahl
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

7.  Developmental regulation of replication fork pausing in Xenopus laevis ribosomal RNA genes.

Authors:  C Maric; B Levacher; O Hyrien
Journal:  J Mol Biol       Date:  1999-08-27       Impact factor: 5.469

8.  Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus.

Authors:  M D Litt; M Simpson; M Gaszner; C D Allis; G Felsenfeld
Journal:  Science       Date:  2001-08-09       Impact factor: 47.728

9.  Methylation of histone H4 by arginine methyltransferase PRMT1 is essential in vivo for many subsequent histone modifications.

Authors:  Suming Huang; Michael Litt; Gary Felsenfeld
Journal:  Genes Dev       Date:  2005-08-15       Impact factor: 11.361

10.  The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken.

Authors:  Kimberley Bruce; Fiona A Myers; Evangelia Mantouvalou; Pascal Lefevre; Ian Greaves; Constanze Bonifer; David J Tremethick; Alan W Thorne; Colyn Crane-Robinson
Journal:  Nucleic Acids Res       Date:  2005-10-04       Impact factor: 16.971

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  27 in total

1.  Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.

Authors:  Emilie Besnard; Amélie Babled; Laure Lapasset; Ollivier Milhavet; Hugues Parrinello; Christelle Dantec; Jean-Michel Marin; Jean-Marc Lemaitre
Journal:  Nat Struct Mol Biol       Date:  2012-07-01       Impact factor: 15.369

2.  Nucleotide supply, not local histone acetylation, sets replication origin usage in transcribed regions.

Authors:  Sophie Gay; Anne-Marie Lachages; Gael A Millot; Sylvain Courbet; Anne Letessier; Michelle Debatisse; Olivier Brison
Journal:  EMBO Rep       Date:  2010-07-30       Impact factor: 8.807

Review 3.  Eukaryotic DNA replication origins: many choices for appropriate answers.

Authors:  Marcel Méchali
Journal:  Nat Rev Mol Cell Biol       Date:  2010-10       Impact factor: 94.444

4.  Single-molecule analysis reveals changes in the DNA replication program for the POU5F1 locus upon human embryonic stem cell differentiation.

Authors:  Sherri S Schultz; Sabrina C Desbordes; Zhuo Du; Settapong Kosiyatrakul; Inna Lipchina; Lorenz Studer; Carl L Schildkraut
Journal:  Mol Cell Biol       Date:  2010-07-20       Impact factor: 4.272

Review 5.  DNA replication: the unbearable lightness of origins.

Authors:  Paolo Norio
Journal:  EMBO Rep       Date:  2006-08       Impact factor: 8.807

Review 6.  Cell cycle regulation of DNA replication.

Authors:  R A Sclafani; T M Holzen
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

7.  Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome.

Authors:  Michaela Schwaiger; Michael B Stadler; Oliver Bell; Hubertus Kohler; Edward J Oakeley; Dirk Schübeler
Journal:  Genes Dev       Date:  2009-03-01       Impact factor: 11.361

Review 8.  Epigenetic landscape for initiation of DNA replication.

Authors:  Vladimir V Sherstyuk; Alexander I Shevchenko; Suren M Zakian
Journal:  Chromosoma       Date:  2013-12-17       Impact factor: 4.316

Review 9.  Programming DNA replication origins and chromosome organization.

Authors:  Christelle Cayrou; Philippe Coulombe; Marcel Méchali
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

10.  Genome-wide approaches to determining origin distribution.

Authors:  Jean-Charles Cadoret; Marie-Noëlle Prioleau
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

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