Literature DB >> 16786303

Characterization of T-DNA insertion mutants and RNAi silenced plants of Arabidopsis thaliana UV-damaged DNA binding protein 2 (AtUV-DDB2).

Asami Koga1, Toyotaka Ishibashi, Seisuke Kimura, Yukinobu Uchiyama, Kengo Sakaguchi.   

Abstract

The human UV-damaged DNA binding protein (UV-DDB), a heterodimeric protein composed of 127 kDa (UV-DDB1) and 48 kDa (UV-DDB2) subunits, has been shown to be involved in DNA repair. To elucidate the in vivo function of plant UV-DDB2, we have analyzed T-DNA insertion mutants of the Arabidopsis thaliana UV-DDB2 subunit (atuv-ddb2 mutants) and AtUV-DDB2 RNAi silenced plants (atuv-ddb2 silenced plants). atuv-ddb2 mutants and atuv-ddb2 silenced plants were both viable, suggesting that AtUV-DDB2 is not essential for survival. Interestingly, both plant types showed a dwarf phenotype, implying impaired growth of the meristem. To the best of our knowledge, this is the first occasion that a dwarf phenotype has been found to be associated with a UV-DDB2 mutation in either plants or animals. The mutants also demonstrated increased sensitivity to UV irradiation, methyl methanesulfonate and hydrogen peroxide treatment, indicating that AtUV-DDB2 is also involved in DNA repair. Our results lead us to suggest that not only does AtUV-DDB2 function in DNA repair, it also has a direct or indirect influence on cell proliferation in the plant meristem.

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Year:  2006        PMID: 16786303     DOI: 10.1007/s11103-006-6408-z

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  40 in total

Review 1.  DNA repair in plants.

Authors:  Seisuke Kimura; Kengo Sakaguchi
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

2.  Efficient promoter cassettes for enhanced expression of foreign genes in dicotyledonous and monocotyledonous plants.

Authors:  I Mitsuhara; M Ugaki; H Hirochika; M Ohshima; T Murakami; Y Gotoh; Y Katayose; S Nakamura; R Honkura; S Nishimiya; K Ueno; A Mochizuki; H Tanimoto; H Tsugawa; Y Otsuki; Y Ohashi
Journal:  Plant Cell Physiol       Date:  1996-01       Impact factor: 4.927

3.  Two types of replication protein A 70 kDa subunit in rice, Oryza sativa: molecular cloning, characterization, and cellular & tissue distribution.

Authors:  T Ishibashi; S Kimura; T Furukawa; M Hatanaka; J Hashimoto; K Sakaguchi
Journal:  Gene       Date:  2001-07-11       Impact factor: 3.688

4.  Characterization of DNA recognition by the human UV-damaged DNA-binding protein.

Authors:  Y Fujiwara; C Masutani; T Mizukoshi; J Kondo; F Hanaoka; S Iwai
Journal:  J Biol Chem       Date:  1999-07-09       Impact factor: 5.157

5.  Cullin 4A associates with the UV-damaged DNA-binding protein DDB.

Authors:  P Shiyanov; A Nag; P Raychaudhuri
Journal:  J Biol Chem       Date:  1999-12-10       Impact factor: 5.157

6.  An Arabidopsis photolyase mutant is hypersensitive to ultraviolet-B radiation.

Authors:  L G Landry; A E Stapleton; J Lim; P Hoffman; J B Hays; V Walbot; R L Last
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-07       Impact factor: 11.205

7.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

8.  Functional complementation of xeroderma pigmentosum complementation group E by replication protein A in an in vitro system.

Authors:  A Kazantsev; D Mu; A F Nichols; X Zhao; S Linn; A Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

9.  Purification and characterization of a human protein that binds to damaged DNA.

Authors:  B J Hwang; G Chu
Journal:  Biochemistry       Date:  1993-02-16       Impact factor: 3.162

10.  DNA repair in higher plants; photoreactivation is the major DNA repair pathway in non-proliferating cells while excision repair (nucleotide excision repair and base excision repair) is active in proliferating cells.

Authors:  Seisuke Kimura; Yasue Tahira; Toyotaka Ishibashi; Yoko Mori; Toshio Mori; Junji Hashimoto; Kengo Sakaguchi
Journal:  Nucleic Acids Res       Date:  2004-05-18       Impact factor: 16.971

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  15 in total

1.  The e3 ubiquitin ligase gene family in plants: regulation by degradation.

Authors:  E Mazzucotelli; S Belloni; D Marone; Am De Leonardis; D Guerra; N Di Fonzo; L Cattivelli; Am Mastrangelo
Journal:  Curr Genomics       Date:  2006       Impact factor: 2.236

2.  Arabidopsis cockayne syndrome A-like proteins 1A and 1B form a complex with CULLIN4 and damage DNA binding protein 1A and regulate the response to UV irradiation.

Authors:  Caiguo Zhang; Huiping Guo; Jun Zhang; Guangqin Guo; Karen S Schumaker; Yan Guo
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

3.  The Arabidopsis cell cycle checkpoint regulators TANMEI/ALT2 and ATR mediate the active process of aluminum-dependent root growth inhibition.

Authors:  Cynthia D Nezames; Caroline A Sjogren; Jesus F Barajas; Paul B Larsen
Journal:  Plant Cell       Date:  2012-02-17       Impact factor: 11.277

4.  DDB2, DDB1A and DET1 exhibit complex interactions during Arabidopsis development.

Authors:  Wesam M Al Khateeb; Dana F Schroeder
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

Review 5.  Protecting DNA from errors and damage: an overview of DNA repair mechanisms in plants compared to mammals.

Authors:  Claudia P Spampinato
Journal:  Cell Mol Life Sci       Date:  2016-12-20       Impact factor: 9.261

6.  Overexpression of Arabidopsis damaged DNA binding protein 1A (DDB1A) enhances UV tolerance.

Authors:  Wesam M Al Khateeb; Dana F Schroeder
Journal:  Plant Mol Biol       Date:  2009-03-14       Impact factor: 4.076

7.  Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase lambda and RPA subunit proteins, is involved in cell proliferation.

Authors:  Tomoyuki Furukawa; Tomohiro Imamura; Hiroko K Kitamoto; Hiroaki Shimada
Journal:  Plant Mol Biol       Date:  2008-01-18       Impact factor: 4.076

Review 8.  Research on plants for the understanding of diseases of nuclear and mitochondrial origin.

Authors:  Claudia P Spampinato; Diego F Gomez-Casati
Journal:  J Biomed Biotechnol       Date:  2012-05-29

9.  Genetic interactions of Arabidopsis thaliana damaged DNA binding protein 1B (DDB1B) with DDB1A, DET1, and COP1.

Authors:  Ashwin L Ganpudi; Dana F Schroeder
Journal:  G3 (Bethesda)       Date:  2013-03-01       Impact factor: 3.154

10.  Regulation and role of Arabidopsis CUL4-DDB1A-DDB2 in maintaining genome integrity upon UV stress.

Authors:  Jean Molinier; Esther Lechner; Eva Dumbliauskas; Pascal Genschik
Journal:  PLoS Genet       Date:  2008-06-13       Impact factor: 5.917

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