Literature DB >> 11470540

Two types of replication protein A 70 kDa subunit in rice, Oryza sativa: molecular cloning, characterization, and cellular & tissue distribution.

T Ishibashi1, S Kimura, T Furukawa, M Hatanaka, J Hashimoto, K Sakaguchi.   

Abstract

Replication protein A (RPA), which is comprised of three subunits, is an important factor involved in DNA replication, repair, and transcription. We isolated and characterized 70 and 32 kDa subunits of RPA from rice (Oryza sativa cv. Nipponbare) termed OsRPA70a and OsRPA32. OsRPA70a shows a low level of homology with OsRPA1 which was isolated from deepwater rice (Oryza sativa cv. Pin Gaew 56), previously. We also succeeded to isolate OsRPA70b which is homologue to OsRPA1 from Oryza sativa cv. Nipponbare. OsRPA70a shows only 33.8% sequence identity with OsRPA70b, indicating that two different types of 70 kDa RPA subunits are present in Oryza sativa cv. Nipponbare. These subunits showed differences in their expression patterns among tissues. The transcripts of OsRPA70a and OsRPA32 were expressed strongly in proliferating tissues such as root tips and young leaves that contain root apical meristem and marginal meristem, respectively, and weakly in the mature leaves which have no proliferating tissues. On the other hand, OsRPA70b was expressed mostly in the proliferating tissues. The roles of these molecules in plant DNA replication and DNA repair are discussed.

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Year:  2001        PMID: 11470540     DOI: 10.1016/s0378-1119(01)00555-8

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  20 in total

1.  ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis.

Authors:  Ran Xia; Junguo Wang; Chunyan Liu; Yu Wang; Youqun Wang; Jixian Zhai; Jun Liu; Xuhui Hong; Xiaofeng Cao; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Cell       Date:  2005-12-02       Impact factor: 11.277

2.  Dynamic behavior of an intrinsically unstructured linker domain is conserved in the face of negligible amino acid sequence conservation.

Authors:  Gary W Daughdrill; Pranesh Narayanaswami; Sara H Gilmore; Agniezka Belczyk; Celeste J Brown
Journal:  J Mol Evol       Date:  2007-08-25       Impact factor: 2.395

3.  Replication protein A2c coupled with replication protein A1c regulates crossover formation during meiosis in rice.

Authors:  Xingwang Li; Yuxiao Chang; Xiaodong Xin; Chunmei Zhu; Xianghua Li; James D Higgins; Changyin Wu
Journal:  Plant Cell       Date:  2013-10-11       Impact factor: 11.277

4.  A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.).

Authors:  Seisuke Kimura; Yukinobu Uchiyama; Nobuyuki Kasai; Satoshi Namekawa; Ai Saotome; Tadamasa Ueda; Tsuyu Ando; Toyotaka Ishibashi; Masahiko Oshige; Tomoyuki Furukawa; Taichi Yamamoto; Junji Hashimoto; Kengo Sakaguchi
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

5.  Functions of alternative replication protein A in initiation and elongation.

Authors:  Aaron C Mason; Rupa Roy; Daniel T Simmons; Marc S Wold
Journal:  Biochemistry       Date:  2010-07-20       Impact factor: 3.162

6.  Characterization of T-DNA insertion mutants and RNAi silenced plants of Arabidopsis thaliana UV-damaged DNA binding protein 2 (AtUV-DDB2).

Authors:  Asami Koga; Toyotaka Ishibashi; Seisuke Kimura; Yukinobu Uchiyama; Kengo Sakaguchi
Journal:  Plant Mol Biol       Date:  2006-05       Impact factor: 4.076

7.  Rare sugar D-allose suppresses gibberellin signaling through hexokinase-dependent pathway in Oryza sativa L.

Authors:  Takeshi Fukumoto; Akihito Kano; Kouhei Ohtani; Yumiko Yamasaki-Kokudo; Bong-Gyu Kim; Kouji Hosotani; Miu Saito; Chikage Shirakawa; Shigeyuki Tajima; Ken Izumori; Toshiaki Ohara; Yoshio Shigematsu; Keiji Tanaka; Yutaka Ishida; Yoko Nishizawa; Yasuomi Tada; Kazuya Ichimura; Kenji Gomi; Kazuya Akimitsu
Journal:  Planta       Date:  2011-06-30       Impact factor: 4.116

8.  Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase lambda and RPA subunit proteins, is involved in cell proliferation.

Authors:  Tomoyuki Furukawa; Tomohiro Imamura; Hiroko K Kitamoto; Hiroaki Shimada
Journal:  Plant Mol Biol       Date:  2008-01-18       Impact factor: 4.076

9.  Characterization of all the subunits of replication factor C from a higher plant, rice (Oryza sativa L.), and their relation to development.

Authors:  Tomoyuki Furukawa; Toyotaka Ishibashi; Seisuke Kimura; Hiroshi Tanaka; Junji Hashimoto; Kengo Sakaguchi
Journal:  Plant Mol Biol       Date:  2003-09       Impact factor: 4.076

10.  Replication protein A (RPA1a) is required for meiotic and somatic DNA repair but is dispensable for DNA replication and homologous recombination in rice.

Authors:  Yuxiao Chang; Liang Gong; Wenya Yuan; Xingwang Li; Guoxing Chen; Xianghua Li; Qifa Zhang; Changyin Wu
Journal:  Plant Physiol       Date:  2009-10-07       Impact factor: 8.340

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