Literature DB >> 27999897

Protecting DNA from errors and damage: an overview of DNA repair mechanisms in plants compared to mammals.

Claudia P Spampinato1.   

Abstract

The genome integrity of all organisms is constantly threatened by replication errors and DNA damage arising from endogenous and exogenous sources. Such base pair anomalies must be accurately repaired to prevent mutagenesis and/or lethality. Thus, it is not surprising that cells have evolved multiple and partially overlapping DNA repair pathways to correct specific types of DNA errors and lesions. Great progress in unraveling these repair mechanisms at the molecular level has been made by several talented researchers, among them Tomas Lindahl, Aziz Sancar, and Paul Modrich, all three Nobel laureates in Chemistry for 2015. Much of this knowledge comes from studies performed in bacteria, yeast, and mammals and has impacted research in plant systems. Two plant features should be mentioned. Plants differ from higher eukaryotes in that they lack a reserve germline and cannot avoid environmental stresses. Therefore, plants have evolved different strategies to sustain genome fidelity through generations and continuous exposure to genotoxic stresses. These strategies include the presence of unique or multiple paralogous genes with partially overlapping DNA repair activities. Yet, in spite (or because) of these differences, plants, especially Arabidopsis thaliana, can be used as a model organism for functional studies. Some advantages of this model system are worth mentioning: short life cycle, availability of both homozygous and heterozygous lines for many genes, plant transformation techniques, tissue culture methods and reporter systems for gene expression and function studies. Here, I provide a current understanding of DNA repair genes in plants, with a special focus on A. thaliana. It is expected that this review will be a valuable resource for future functional studies in the DNA repair field, both in plants and animals.

Entities:  

Keywords:  BER; DNA repair; HR; MMR; NER; NHEJ; Photolyases

Mesh:

Year:  2016        PMID: 27999897     DOI: 10.1007/s00018-016-2436-2

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  207 in total

1.  Characterization of ScMat1, a putative TFIIH subunit from sugarcane.

Authors:  Agustina Gentile; Renata F Ditt; Fabio O Dias; Marcio J Da Silva; Marcelo C Dornelas; Marcelo Menossi
Journal:  Plant Cell Rep       Date:  2009-01-16       Impact factor: 4.570

2.  Expression and function of AtMBD4L, the single gene encoding the nuclear DNA glycosylase MBD4L in Arabidopsis.

Authors:  Florencia Nota; Damián A Cambiagno; Pamela Ribone; María E Alvarez
Journal:  Plant Sci       Date:  2015-03-20       Impact factor: 4.729

Review 3.  The complex choreography of transcription-coupled repair.

Authors:  Graciela Spivak; Ann K Ganesan
Journal:  DNA Repair (Amst)       Date:  2014-04-19

Review 4.  Base excision repair.

Authors:  Hans E Krokan; Magnar Bjørås
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-04-01       Impact factor: 10.005

5.  Structural and evolutionary aspects of antenna chromophore usage by class II photolyases.

Authors:  Stephan Kiontke; Petra Gnau; Reinhard Haselsberger; Alfred Batschauer; Lars-Oliver Essen
Journal:  J Biol Chem       Date:  2014-05-21       Impact factor: 5.157

6.  Characterization of the plant homolog of Nijmegen breakage syndrome 1: Involvement in DNA repair and recombination.

Authors:  Noriyuki Akutsu; Kenta Iijima; Takeo Hinata; Hiroshi Tauchi
Journal:  Biochem Biophys Res Commun       Date:  2006-12-13       Impact factor: 3.575

7.  Effects of XRCC2 and RAD51B mutations on somatic and meiotic recombination in Arabidopsis thaliana.

Authors:  Olivier Da Ines; Fabienne Degroote; Simon Amiard; Chantal Goubely; Maria E Gallego; Charles I White
Journal:  Plant J       Date:  2013-04-16       Impact factor: 6.417

Review 8.  Repair and tolerance of oxidative DNA damage in plants.

Authors:  Teresa Roldán-Arjona; Rafael R Ariza
Journal:  Mutat Res       Date:  2008-07-29       Impact factor: 2.433

Review 9.  Structure and function of photolyase and in vivo enzymology: 50th anniversary.

Authors:  Aziz Sancar
Journal:  J Biol Chem       Date:  2008-08-04       Impact factor: 5.157

Review 10.  An Overview of the Molecular Mechanisms of Recombinational DNA Repair.

Authors:  Stephen C Kowalczykowski
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-11-02       Impact factor: 10.005

View more
  22 in total

1.  APURINIC/APYRIMIDINIC ENDONUCLEASE2 and ZINC FINGER DNA 3'-PHOSPHOESTERASE Play Overlapping Roles in the Maintenance of Epigenome and Genome Stability.

Authors:  Jinchao Li; Wenjie Liang; Yan Li; Weiqiang Qian
Journal:  Plant Cell       Date:  2018-08-22       Impact factor: 11.277

2.  High-Throughput CRISPR/Cas9 Mutagenesis Streamlines Trait Gene Identification in Maize.

Authors:  Hai-Jun Liu; Liumei Jian; Jieting Xu; Qinghua Zhang; Maolin Zhang; Minliang Jin; Yong Peng; Jiali Yan; Baozhu Han; Jie Liu; Fan Gao; Xiangguo Liu; Lei Huang; Wenjie Wei; Yunxiu Ding; Xiaofeng Yang; Zhenxian Li; Mingliang Zhang; Jiamin Sun; Minji Bai; Wenhao Song; Hanmo Chen; Xi'ang Sun; Wenqiang Li; Yuming Lu; Ya Liu; Jiuran Zhao; Yangwen Qian; David Jackson; Alisdair R Fernie; Jianbing Yan
Journal:  Plant Cell       Date:  2020-02-25       Impact factor: 11.277

3.  A SWI/SNF subunit regulates chromosomal dissociation of structural maintenance complex 5 during DNA repair in plant cells.

Authors:  Jieming Jiang; Ning Mao; Huan Hu; Jiahang Tang; Danlu Han; Song Liu; Qian Wu; Yiyang Liu; Changlian Peng; Jianbin Lai; Chengwei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-08       Impact factor: 11.205

4.  The Transcriptional Coactivator ADA2b Recruits a Structural Maintenance Protein to Double-Strand Breaks during DNA Repair in Plants.

Authors:  Jianbin Lai; Jieming Jiang; Qian Wu; Ning Mao; Danlu Han; Huan Hu; Chengwei Yang
Journal:  Plant Physiol       Date:  2018-02-20       Impact factor: 8.340

5.  The F-Box-Like Protein FBL17 Is a Regulator of DNA-Damage Response and Colocalizes with RETINOBLASTOMA RELATED1 at DNA Lesion Sites.

Authors:  Naomie Gentric; Kinda Masoud; Robin P Journot; Valérie Cognat; Marie-Edith Chabouté; Sandra Noir; Pascal Genschik
Journal:  Plant Physiol       Date:  2020-05-15       Impact factor: 8.340

6.  Two class II CPD photolyases, PiPhr1 and PiPhr2, with CPD repair activity from the Antarctic diatom Phaeodactylum tricornutum ICE-H.

Authors:  Meiling An; Changfeng Qu; Jinlai Miao; Zhenxia Sha
Journal:  3 Biotech       Date:  2021-07-21       Impact factor: 2.893

7.  OxyS small RNA induces cell cycle arrest to allow DNA damage repair.

Authors:  Shir Barshishat; Maya Elgrably-Weiss; Jonathan Edelstein; Jens Georg; Sutharsan Govindarajan; Meytal Haviv; Patrick R Wright; Wolfgang R Hess; Shoshy Altuvia
Journal:  EMBO J       Date:  2017-12-13       Impact factor: 14.012

Review 8.  Emerging roles of chromatin in the maintenance of genome organization and function in plants.

Authors:  Zaida Vergara; Crisanto Gutierrez
Journal:  Genome Biol       Date:  2017-05-23       Impact factor: 13.583

9.  Specific-Locus Amplified Fragment Sequencing Reveals Spontaneous Single-Nucleotide Mutations in Rice OsMsh6 Mutants.

Authors:  Hairui Cui; Qiongyu Wu; Bin Zhu
Journal:  Biomed Res Int       Date:  2017-05-15       Impact factor: 3.411

10.  The Seed Repair Response during Germination: Disclosing Correlations between DNA Repair, Antioxidant Response, and Chromatin Remodeling in Medicago truncatula.

Authors:  Andrea Pagano; Susana de Sousa Araújo; Anca Macovei; Paola Leonetti; Alma Balestrazzi
Journal:  Front Plant Sci       Date:  2017-11-14       Impact factor: 5.753

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.