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Literature DB >> 16752218

The GC content of primates and rodents genomes is not at equilibrium: a reply to Antezana.

Laurent Duret.

Abstract

Mesh：

Year: 2006 PMID： 16752218 DOI： 10.1007/s00239-005-0228-7

Source DB: PubMed Journal: J Mol Evol ISSN： 0022-2844 Impact factor: 2.395

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20 in total

1. Compositional evolution of noncoding DNA in the human and chimpanzee genomes.

Authors: Matthew T Webster; Nick G C Smith; Hans Ellegren
Journal: Mol Biol Evol Date: 2003-02 Impact factor: 16.240

2. The compositional evolution of the murid genome.

Authors: Nick G C Smith; Adam Eyre-Walker
Journal: J Mol Evol Date: 2002-08 Impact factor: 2.395

3. The decline of isochores in mammals: an assessment of the GC content variation along the mammalian phylogeny.

Authors: Elise M S Belle; Laurent Duret; Nicolas Galtier; Adam Eyre-Walker
Journal: J Mol Evol Date: 2004-06 Impact factor: 2.395

4. Homology-dependent methylation in primate repetitive DNA.

Authors: Julien Meunier; Adel Khelifi; Vincent Navratil; Laurent Duret
Journal: Proc Natl Acad Sci U S A Date: 2005-03-29 Impact factor: 11.205

5. Duplication-targeted DNA methylation and mutagenesis in the evolution of eukaryotic chromosomes.

Authors: M C Kricker; J W Drake; M Radman
Journal: Proc Natl Acad Sci U S A Date: 1992-02-01 Impact factor: 11.205

6. Problems with parsimony in sequences of biased base composition.

Authors: A Eyre-Walker
Journal: J Mol Evol Date: 1998-12 Impact factor: 2.395

7. Mutation rates in humans. II. Sporadic mutation-specific rates and rate of detrimental human mutations inferred from hemophilia B.

Authors: F Giannelli; T Anagnostopoulos; P M Green
Journal: Am J Hum Genet Date: 1999-12 Impact factor: 11.025

8. Substantial regional variation in substitution rates in the human genome: importance of GC content, gene density, and telomere-specific effects.

Authors: Peter F Arndt; Terence Hwa; Dmitri A Petrov
Journal: J Mol Evol Date: 2005-05-31 Impact factor: 2.395

9. DNA methylation and the frequency of CpG in animal DNA.

Authors: A P Bird
Journal: Nucleic Acids Res Date: 1980-04-11 Impact factor: 16.971

10. Recombination drives the evolution of GC-content in the human genome.

Authors: Julien Meunier; Laurent Duret
Journal: Mol Biol Evol Date: 2004-02-12 Impact factor: 16.240

11 in total

1. Context dependent substitution biases vary within the human genome.

Authors: P Andrew Nevarez; Christopher M DeBoever; Benjamin J Freeland; Marissa A Quitt; Eliot C Bush
Journal: BMC Bioinformatics Date: 2010-09-15 Impact factor: 3.169

2. Highly conserved regimes of neighbor-base-dependent mutation generated the background primary-structural heterogeneities along vertebrate chromosomes.

Authors: Marcos A Antezana; I King Jordan
Journal: PLoS One Date: 2008-05-14 Impact factor: 3.240

3. New words in human mutagenesis.

Authors: Alexander Y Panchin; Sergey I Mitrofanov; Andrei V Alexeevski; Sergey A Spirin; Yuri V Panchin
Journal: BMC Bioinformatics Date: 2011-06-30 Impact factor: 3.169

Review 4. Widespread recurrent evolution of genomic features.

Authors: Ignacio Maeso; Scott William Roy; Manuel Irimia
Journal: Genome Biol Evol Date: 2012-03-13 Impact factor: 3.416

5. Directionality of point mutation and 5-methylcytosine deamination rates in the chimpanzee genome.

Authors: Cizhong Jiang; Zhongming Zhao
Journal: BMC Genomics Date: 2006-12-13 Impact factor: 3.969

6. Population size dependence of fitness effect distribution and substitution rate probed by biophysical model of protein thermostability.

Authors: Richard A Goldstein
Journal: Genome Biol Evol Date: 2013 Impact factor: 3.416