Literature DB >> 16751345

STABILIZED1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover, and stress tolerance in Arabidopsis.

Byeong-ha Lee1, Avnish Kapoor, Jianhua Zhu, Jian-Kang Zhu.   

Abstract

In plants, many gene transcripts are very unstable, which is important for the tight control of their temporal and spatial expression patterns. To identify cellular factors controlling the stability of unstable mRNAs in plants, we used luciferase imaging in Arabidopsis thaliana to isolate a recessive mutant, stabilized1-1 (sta1-1), with enhanced stability of the normally unstable luciferase transcript. The sta1-1 mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes. STA1 encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Our results show that STA1 is a pre-mRNA splicing factor required not only for splicing but also for the turnover of unstable transcripts and that it has an important role in plant responses to abiotic stresses.

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Year:  2006        PMID: 16751345      PMCID: PMC1488911          DOI: 10.1105/tpc.106.042184

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  63 in total

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2.  RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance.

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Review 3.  RNA silencing: small RNAs as ubiquitous regulators of gene expression.

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Journal:  Curr Opin Plant Biol       Date:  2002-10       Impact factor: 7.834

4.  Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time.

Authors:  Victor Quesada; Richard Macknight; Caroline Dean; Gordon G Simpson
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

Review 5.  Role of microRNAs in plant and animal development.

Authors:  James C Carrington; Victor Ambros
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

6.  The HAT helix, a repetitive motif implicated in RNA processing.

Authors:  P J Preker; W Keller
Journal:  Trends Biochem Sci       Date:  1998-01       Impact factor: 13.807

7.  SC35-mediated reconstitution of splicing in U2AF-depleted nuclear extract.

Authors:  A M MacMillan; P S McCaw; J D Crispino; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-07       Impact factor: 11.205

8.  DNA Sequence Analysis of a Complementary DNA for Cold-Regulated Arabidopsis Gene cor15 and Characterization of the COR 15 Polypeptide.

Authors:  C Lin; M F Thomashow
Journal:  Plant Physiol       Date:  1992-06       Impact factor: 8.340

9.  Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis pigmentosa, is required for U4/U6*U5 tri-snRNP formation and pre-mRNA splicing.

Authors:  Olga V Makarova; Evgeny M Makarov; Sunbin Liu; Hans-Peter Vornlocher; Reinhard Lührmann
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

10.  ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase.

Authors:  Zhizhong Gong; Teresa Morales-Ruiz; Rafael R Ariza; Teresa Roldán-Arjona; Lisa David; Jian Kang Zhu
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  69 in total

Review 1.  Biogenesis, turnover, and mode of action of plant microRNAs.

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Review 2.  The crosstalk between plant microRNA biogenesis factors and the spliceosome.

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Review 3.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

Review 4.  How do 'housekeeping' genes control organogenesis?--Unexpected new findings on the role of housekeeping genes in cell and organ differentiation.

Authors:  Hirokazu Tsukaya; Mary E Byrne; Gorou Horiguchi; Munetaka Sugiyama; Mieke Van Lijsebettens; Michael Lenhard
Journal:  J Plant Res       Date:  2012-08-26       Impact factor: 2.629

5.  LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.

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Journal:  Plant Cell       Date:  2012-12-07       Impact factor: 11.277

Review 6.  Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants.

Authors:  Ian M Silverman; Fan Li; Brian D Gregory
Journal:  Plant Sci       Date:  2013-02-01       Impact factor: 4.729

7.  Glycine-rich RNA-binding proteins are functionally conserved in Arabidopsis thaliana and Oryza sativa during cold adaptation process.

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Journal:  J Exp Bot       Date:  2010-03-15       Impact factor: 6.992

8.  Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis.

Authors:  Xiangqiang Zhan; Bangshing Wang; Hongjiang Li; Renyi Liu; Rajwant K Kalia; Jian-Kang Zhu; Viswanathan Chinnusamy
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

9.  Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3.

Authors:  Ashraf Abdeen; Jaimie Schnell; Brian Miki
Journal:  BMC Genomics       Date:  2010-01-28       Impact factor: 3.969

Review 10.  Post-transcriptional regulation of gene expression in plants during abiotic stress.

Authors:  Maïna Floris; Hany Mahgoub; Elodie Lanet; Christophe Robaglia; Benoît Menand
Journal:  Int J Mol Sci       Date:  2009-07-10       Impact factor: 6.208

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