Literature DB >> 16690740

The callipyge mutation enhances bidirectional long-range DLK1-GTL2 intergenic transcription in cis.

Haruko Takeda1, Florian Caiment, Maria Smit, Samuel Hiard, Xavier Tordoir, Noelle Cockett, Michel Georges, Carole Charlier.   

Abstract

The callipyge mutation (CLPG) is an A to G transition that affects a muscle-specific long-range control element located in the middle of the 90-kb DLK1-GTL2 intergenic (IG) region. It causes ectopic expression of a 327-kb cluster of imprinted genes in skeletal muscle, resulting in the callipyge muscular hypertrophy and its non-Mendelian inheritance pattern known as polar overdominance. We herein demonstrate that the CLPG mutation alters the muscular epigenotype of the DLK1-GTL2 IG region in cis, including hypomethylation, acquisition of novel DNase-I hypersentivite sites, and, most strikingly, strongly enhanced bidirectional, long-range IG transcription. The callipyge phenotype thus emerges as a unique model to study the functional significance of IG transcription, which recently has proven to be a widespread, yet elusive, feature of the mammalian genome.

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Year:  2006        PMID: 16690740      PMCID: PMC1472439          DOI: 10.1073/pnas.0602844103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Authors:  R I Gregory; R Feil
Journal:  Nucleic Acids Res       Date:  1999-11-15       Impact factor: 16.971

2.  Mosaicism of Solid Gold supports the causality of a noncoding A-to-G transition in the determinism of the callipyge phenotype.

Authors:  Maria Smit; Karin Segers; Laura Garcia Carrascosa; Tracy Shay; Francesca Baraldi; Gabor Gyapay; Gary Snowder; Michel Georges; Noelle Cockett; Carole Charlier
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Review 3.  The callipyge locus: evidence for the trans interaction of reciprocally imprinted genes.

Authors:  Michel Georges; Carole Charlier; Noelle Cockett
Journal:  Trends Genet       Date:  2003-05       Impact factor: 11.639

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5.  Identification of the single base change causing the callipyge muscle hypertrophy phenotype, the only known example of polar overdominance in mammals.

Authors:  Brad A Freking; Susan K Murphy; Andrew A Wylie; Simon J Rhodes; John W Keele; Kreg A Leymaster; Randy L Jirtle; Timothy P L Smith
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

6.  Asymmetric regulation of imprinting on the maternal and paternal chromosomes at the Dlk1-Gtl2 imprinted cluster on mouse chromosome 12.

Authors:  Shau-Ping Lin; Neil Youngson; Shuji Takada; Hervé Seitz; Wolf Reik; Martina Paulsen; Jerome Cavaille; Anne C Ferguson-Smith
Journal:  Nat Genet       Date:  2003-08-24       Impact factor: 38.330

7.  A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain.

Authors:  Hervé Seitz; Hélène Royo; Marie-Line Bortolin; Shau-Ping Lin; Anne C Ferguson-Smith; Jérôme Cavaillé
Journal:  Genome Res       Date:  2004-08-12       Impact factor: 9.043

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Authors:  David F Rogan; David J Cousins; Samantha Santangelo; Panayiotis A Ioannou; Michael Antoniou; Tak H Lee; Dontcho Z Staynov
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

9.  Probing chromatin structure with nuclease sensitivity assays.

Authors:  R I Gregory; S Khosla; R Feil
Journal:  Methods Mol Biol       Date:  2001

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2.  The Begain gene marks the centromeric boundary of the imprinted region on mouse chromosome 12.

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Journal:  Mamm Genome       Date:  2009-07-30       Impact factor: 2.957

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5.  Regulation of DLK1 by the maternally expressed miR-379/miR-544 cluster may underlie callipyge polar overdominance inheritance.

Authors:  Yun-Qian Gao; Xin Chen; Pei Wang; Lei Lu; Wei Zhao; Chen Chen; Cai-Ping Chen; Tao Tao; Jie Sun; Yan-Yan Zheng; Jie Du; Chao-Jun Li; Zhen-Ji Gan; Xiang Gao; Hua-Qun Chen; Min-Sheng Zhu
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Review 6.  Meat Science and Muscle Biology Symposium: stem cell niche and postnatal muscle growth.

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Journal:  J Anim Sci       Date:  2011-11-18       Impact factor: 3.159

7.  Over-expression of the miRNA cluster at chromosome 14q32 in the alcoholic brain correlates with suppression of predicted target mRNA required for oligodendrocyte proliferation.

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Journal:  Gene       Date:  2013-06-06       Impact factor: 3.688

8.  Dlk1 is necessary for proper skeletal muscle development and regeneration.

Authors:  Jolena N Waddell; Peijing Zhang; Yefei Wen; Sanjay K Gupta; Aleksey Yevtodiyenko; Jennifer V Schmidt; Christopher A Bidwell; Ashok Kumar; Shihuan Kuang
Journal:  PLoS One       Date:  2010-11-29       Impact factor: 3.240

9.  A novel H19 antisense RNA overexpressed in breast cancer contributes to paternal IGF2 expression.

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10.  Genomic imprinting effects on adult body composition in mice.

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Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-12       Impact factor: 11.205

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