Literature DB >> 26487685

Regulation of DLK1 by the maternally expressed miR-379/miR-544 cluster may underlie callipyge polar overdominance inheritance.

Yun-Qian Gao1, Xin Chen1, Pei Wang1, Lei Lu1, Wei Zhao1, Chen Chen1, Cai-Ping Chen1, Tao Tao1, Jie Sun1, Yan-Yan Zheng1, Jie Du2, Chao-Jun Li1, Zhen-Ji Gan1, Xiang Gao1, Hua-Qun Chen3, Min-Sheng Zhu4.   

Abstract

Inheritance of the callipyge phenotype in sheep is an example of polar overdominance inheritance, an unusual mode of inheritance. To investigate the underlying molecular mechanism, we profiled the expression of the genes located in the Delta-like 1 homolog (Dlk1)-type III iodothyronine deiodinase (Dio3) imprinting region in mice. We found that the transcripts of the microRNA (miR) 379/miR-544 cluster were highly expressed in neonatal muscle and paralleled the expression of the Dlk1. We then determined the in vivo role of the miR-379/miR-544 cluster by establishing a mouse line in which the cluster was ablated. The maternal heterozygotes of young mutant mice displayed a hypertrophic tibialis anterior muscle, extensor digitorum longus muscle, gastrocnemius muscle, and gluteus maximus muscle and elevated expression of the DLK1 protein. Reduced expression of DLK1 was mediated by miR-329, a member of this cluster. Our results suggest that maternal expression of the imprinted miR-379/miR-544 cluster regulates paternal expression of the Dlk1 gene in mice. We therefore propose a miR-based molecular working model for polar overdominance inheritance.

Entities:  

Keywords:  DLK1; callipyge; miR-379/miR-544 cluster; muscle hypertrophy

Mesh:

Substances:

Year:  2015        PMID: 26487685      PMCID: PMC4640741          DOI: 10.1073/pnas.1511448112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Asymmetric regulation of imprinting on the maternal and paternal chromosomes at the Dlk1-Gtl2 imprinted cluster on mouse chromosome 12.

Authors:  Shau-Ping Lin; Neil Youngson; Shuji Takada; Hervé Seitz; Wolf Reik; Martina Paulsen; Jerome Cavaille; Anne C Ferguson-Smith
Journal:  Nat Genet       Date:  2003-08-24       Impact factor: 38.330

2.  A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain.

Authors:  Hervé Seitz; Hélène Royo; Marie-Line Bortolin; Shau-Ping Lin; Anne C Ferguson-Smith; Jérôme Cavaillé
Journal:  Genome Res       Date:  2004-08-12       Impact factor: 9.043

3.  RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus.

Authors:  Erica Davis; Florian Caiment; Xavier Tordoir; Jérôme Cavaillé; Anne Ferguson-Smith; Noelle Cockett; Michel Georges; Carole Charlier
Journal:  Curr Biol       Date:  2005-04-26       Impact factor: 10.834

4.  The callipyge mutation enhances bidirectional long-range DLK1-GTL2 intergenic transcription in cis.

Authors:  Haruko Takeda; Florian Caiment; Maria Smit; Samuel Hiard; Xavier Tordoir; Noelle Cockett; Michel Georges; Carole Charlier
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-11       Impact factor: 11.205

5.  A muscle hypertrophy condition in lamb (callipyge): characterization of effects on muscle growth and meat quality traits.

Authors:  M Koohmaraie; S D Shackelford; T L Wheeler; S M Lonergan; M E Doumit
Journal:  J Anim Sci       Date:  1995-12       Impact factor: 3.159

Review 6.  Skeletal muscle hypertrophy and atrophy signaling pathways.

Authors:  David J Glass
Journal:  Int J Biochem Cell Biol       Date:  2005-10       Impact factor: 5.085

7.  Abnormal postnatal maintenance of elevated DLK1 transcript levels in callipyge sheep.

Authors:  Susan K Murphy; Brad A Freking; Timothy P L Smith; Kreg Leymaster; Catherine M Nolan; Andrew A Wylie; Heather K Evans; Randy L Jirtle
Journal:  Mamm Genome       Date:  2005-03       Impact factor: 2.957

8.  Postnatal changes in the expression of genes located in the callipyge region in sheep skeletal muscle.

Authors:  A C Perkins; L N Kramer; D M Spurlock; T S Hadfield; N E Cockett; C A Bidwell
Journal:  Anim Genet       Date:  2006-12       Impact factor: 3.169

9.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

10.  Nuclear receptor/microRNA circuitry links muscle fiber type to energy metabolism.

Authors:  Zhenji Gan; John Rumsey; Bethany C Hazen; Ling Lai; Teresa C Leone; Rick B Vega; Hui Xie; Kevin E Conley; Johan Auwerx; Steven R Smith; Eric N Olson; Anastasia Kralli; Daniel P Kelly
Journal:  J Clin Invest       Date:  2013-05-08       Impact factor: 14.808

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  20 in total

1.  Delta-like 1 homolog in Capra hircus: molecular characteristics, expression pattern and phylogeny.

Authors:  Jiangtao Hu; Wei Zhao; Siyuan Zhan; Ping Xiao; Jingxuan Zhou; Linjie Wang; Li Li; Hongping Zhang; Lili Niu; Tao Zhong
Journal:  Mol Biol Rep       Date:  2016-04-23       Impact factor: 2.316

2.  Epigenome-wide association study of DNA methylation and microRNA expression highlights novel pathways for human complex traits.

Authors:  Tianxiao Huan; Michael Mendelson; Roby Joehanes; Chen Yao; Chunyu Liu; Ci Song; Anindya Bhattacharya; Jian Rong; Kahraman Tanriverdi; Joshua Keefe; Joanne M Murabito; Paul Courchesne; Martin G Larson; Jane E Freedman; Daniel Levy
Journal:  Epigenetics       Date:  2019-07-17       Impact factor: 4.528

3.  Dlk1-Dio3 cluster miRNAs regulate mitochondrial functions in the dystrophic muscle in Duchenne muscular dystrophy.

Authors:  Ai Vu Hong; Nathalie Bourg; Peggy Sanatine; Jerome Poupiot; Karine Charton; Evelyne Gicquel; Emmanuelle Massourides; Marco Spinazzi; Isabelle Richard; David Israeli
Journal:  Life Sci Alliance       Date:  2022-10-20

4.  Identification and Expression Profiling of miRNAome in Goat longissimus dorsi Muscle from Prenatal Stages to a Neonatal Stage.

Authors:  Jiazhong Guo; Wei Zhao; Siyuan Zhan; Li Li; Tao Zhong; Linjie Wang; Yao Dong; Hongping Zhang
Journal:  PLoS One       Date:  2016-10-31       Impact factor: 3.240

5.  MicroRNA-544 promotes colorectal cancer progression by targeting forkhead box O1.

Authors:  Guo-Dong Yao; Ya-Feng Zhang; Peng Chen; Xiu-Bao Ren
Journal:  Oncol Lett       Date:  2017-11-09       Impact factor: 2.967

6.  Myostatin-deficiency in mice increases global gene expression at the Dlk1-Dio3 locus in the skeletal muscle.

Authors:  Keisuke Hitachi; Kunihiro Tsuchida
Journal:  Oncotarget       Date:  2017-01-24

7.  Small-RNA sequencing identifies dynamic microRNA deregulation during skeletal muscle lineage progression.

Authors:  David Castel; Meryem B Baghdadi; Sébastien Mella; Barbara Gayraud-Morel; Virginie Marty; Jérôme Cavaillé; Christophe Antoniewski; Shahragim Tajbakhsh
Journal:  Sci Rep       Date:  2018-03-09       Impact factor: 4.379

Review 8.  Regulatory links between imprinted genes: evolutionary predictions and consequences.

Authors:  Manus M Patten; Michael Cowley; Rebecca J Oakey; Robert Feil
Journal:  Proc Biol Sci       Date:  2016-02-10       Impact factor: 5.349

9.  Identification of genes directly responding to DLK1 signaling in Callipyge sheep.

Authors:  Hui Yu; Jolena N Waddell; Shihuan Kuang; Ross L Tellam; Noelle E Cockett; Christopher A Bidwell
Journal:  BMC Genomics       Date:  2018-04-24       Impact factor: 3.969

Review 10.  A Hearty Dose of Noncoding RNAs: The Imprinted DLK1-DIO3 Locus in Cardiac Development and Disease.

Authors:  Tiffany L Dill; Francisco J Naya
Journal:  J Cardiovasc Dev Dis       Date:  2018-07-10
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