Literature DB >> 16682559

Dimerization of ADAR2 is mediated by the double-stranded RNA binding domain.

Hanne Poulsen1, Rasmus Jorgensen, Anders Heding, Finn C Nielsen, Bjarne Bonven, Jan Egebjerg.   

Abstract

Members of the family of adenosine deaminases acting on RNA (ADARs) can catalyze the hydrolytic deamination of adenosine to inosine and thereby change the sequence of specific mRNAs with highly double-stranded structures. The ADARs all contain one or more repeats of the double-stranded RNA binding motif (DRBM). By both in vitro and in vivo assays, we show that the DRBMs of rat ADAR2 are necessary and sufficient for dimerization of the enzyme. Bioluminescence resonance energy transfer (BRET) demonstrates that ADAR2 also exists as dimers in living mammalian cells and that mutation of DRBM1 lowers the dimerization affinity while mutation of DRBM2 does not. Nonetheless, the editing efficiency of the GluR2 Q/R site depends on a functional DRBM2. The ADAR2 DRBMs thus serve differential roles in RNA dimerization and GluR2 Q/R editing, and we propose a model for RNA editing that incorporates the new findings.

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Year:  2006        PMID: 16682559      PMCID: PMC1484439          DOI: 10.1261/rna.2314406

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  46 in total

1.  A dynamically tuned double-stranded RNA binding mechanism for the activation of antiviral kinase PKR.

Authors:  S Nanduri; F Rahman; B R Williams; J Qin
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

2.  Heterologous dimerization domains functionally substitute for the double-stranded RNA binding domains of the kinase PKR.

Authors:  T L Ung; C Cao; J Lu; K Ozato; T E Dever
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

Review 3.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

4.  In vitro analysis of the binding of ADAR2 to the pre-mRNA encoding the GluR-B R/G site.

Authors:  M Ohman; A M Källman; B L Bass
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

5.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

6.  Conformational changes that occur during an RNA-editing adenosine deamination reaction.

Authors:  H Y Yi-Brunozzi; O M Stephens; P A Beal
Journal:  J Biol Chem       Date:  2001-07-30       Impact factor: 5.157

7.  The role of binding domains for dsRNA and Z-DNA in the in vivo editing of minimal substrates by ADAR1.

Authors:  A Herbert; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

8.  Binding of double-stranded RNA to protein kinase PKR is required for dimerization and promotes critical autophosphorylation events in the activation loop.

Authors:  F Zhang; P R Romano; T Nagamura-Inoue; B Tian; T E Dever; M B Mathews; K Ozato; A G Hinnebusch
Journal:  J Biol Chem       Date:  2001-05-03       Impact factor: 5.157

9.  Adenosine to inosine editing by ADAR2 requires formation of a ternary complex on the GluR-B R/G site.

Authors:  Dominic C J Jaikaran; Cynthia H Collins; Andrew M MacMillan
Journal:  J Biol Chem       Date:  2002-08-05       Impact factor: 5.157

10.  CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain.

Authors:  H Poulsen; J Nilsson; C K Damgaard; J Egebjerg; J Kjems
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

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  30 in total

Review 1.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

2.  Extra double-stranded RNA binding domain (dsRBD) in a squid RNA editing enzyme confers resistance to high salt environment.

Authors:  Juan Pablo Palavicini; Rodrigo A Correa-Rojas; Joshua J C Rosenthal
Journal:  J Biol Chem       Date:  2012-03-28       Impact factor: 5.157

3.  An extra double-stranded RNA binding domain confers high activity to a squid RNA editing enzyme.

Authors:  Juan Pablo Palavicini; Mary A O'Connell; Joshua J C Rosenthal
Journal:  RNA       Date:  2009-04-23       Impact factor: 4.942

4.  Exposure of neurons to excitotoxic levels of glutamate induces cleavage of the RNA editing enzyme, adenosine deaminase acting on RNA 2, and loss of GLUR2 editing.

Authors:  S S Mahajan; K H Thai; K Chen; E Ziff
Journal:  Neuroscience       Date:  2011-05-19       Impact factor: 3.590

Review 5.  ADAR proteins: double-stranded RNA and Z-DNA binding domains.

Authors:  Pierre Barraud; Frédéric H-T Allain
Journal:  Curr Top Microbiol Immunol       Date:  2012       Impact factor: 4.291

6.  RNA binding by a novel helical fold of b2 protein from wuhan nodavirus mediates the suppression of RNA interference and promotes b2 dimerization.

Authors:  Nan Qi; Dawei Cai; Yang Qiu; Jiazheng Xie; Zhaowei Wang; Jie Si; Jiamin Zhang; Xi Zhou; Yuanyang Hu
Journal:  J Virol       Date:  2011-07-06       Impact factor: 5.103

7.  RNA-editing enzymes ADAR1 and ADAR2 coordinately regulate the editing and expression of Ctn RNA.

Authors:  Aparna Anantharaman; Omid Gholamalamdari; Abid Khan; Je-Hyun Yoon; Michael F Jantsch; Jochen C Hartner; Myriam Gorospe; Supriya G Prasanth; Kannanganattu V Prasanth
Journal:  FEBS Lett       Date:  2017-08-30       Impact factor: 4.124

8.  Dysregulated A to I RNA editing and non-coding RNAs in neurodegeneration.

Authors:  Minati Singh
Journal:  Front Genet       Date:  2013-01-22       Impact factor: 4.599

Review 9.  A-to-I editing of coding and non-coding RNAs by ADARs.

Authors:  Kazuko Nishikura
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-09       Impact factor: 94.444

10.  Bi-allelic ADARB1 Variants Associated with Microcephaly, Intellectual Disability, and Seizures.

Authors:  Tiong Yang Tan; Jiří Sedmík; Mark P Fitzgerald; Rivka Sukenik Halevy; Liam P Keegan; Ingo Helbig; Lina Basel-Salmon; Lior Cohen; Rachel Straussberg; Wendy K Chung; Mayada Helal; Reza Maroofian; Henry Houlden; Jane Juusola; Simon Sadedin; Lynn Pais; Katherine B Howell; Susan M White; John Christodoulou; Mary A O'Connell
Journal:  Am J Hum Genet       Date:  2020-03-26       Impact factor: 11.025

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