Literature DB >> 12163487

Adenosine to inosine editing by ADAR2 requires formation of a ternary complex on the GluR-B R/G site.

Dominic C J Jaikaran1, Cynthia H Collins, Andrew M MacMillan.   

Abstract

RNA editing by members of the ADAR (adenosine deaminase that acts on RNA) enzyme family involves hydrolytic deamination of adenosine to inosine within the context of a double-stranded pre-mRNA substrate. Editing of the human GluR-B transcript is catalyzed by the enzyme ADAR2 at the Q/R and R/G sites. We have established a minimal RNA substrate for editing based on the R/G site and have characterized the interaction of ADAR2 with this RNA by gel shift, kinetic, and cross-linking analyses. Gel shift analysis revealed that two complexes are formed on the RNA as protein concentration is increased; the ADAR monomers can be cross-linked to one another in an RNA-dependent fashion. We performed a detailed kinetic study of the editing reaction; the data from this study are consistent with a reaction scheme in which formation of an ADAR2.RNA ternary complex is required for efficient RNA editing and in which formation of this complex is rate determining. These observations suggest that RNA adenosine deaminases function as homodimers on their RNA substrates and may partially explain regulation of RNA editing in these systems.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12163487     DOI: 10.1074/jbc.M204126200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

Review 1.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

2.  Extra double-stranded RNA binding domain (dsRBD) in a squid RNA editing enzyme confers resistance to high salt environment.

Authors:  Juan Pablo Palavicini; Rodrigo A Correa-Rojas; Joshua J C Rosenthal
Journal:  J Biol Chem       Date:  2012-03-28       Impact factor: 5.157

3.  Dimerization of ADAR2 is mediated by the double-stranded RNA binding domain.

Authors:  Hanne Poulsen; Rasmus Jorgensen; Anders Heding; Finn C Nielsen; Bjarne Bonven; Jan Egebjerg
Journal:  RNA       Date:  2006-05-08       Impact factor: 4.942

Review 4.  How do ADARs bind RNA? New protein-RNA structures illuminate substrate recognition by the RNA editing ADARs.

Authors:  Justin M Thomas; Peter A Beal
Journal:  Bioessays       Date:  2017-02-20       Impact factor: 4.345

5.  Molecular dynamics simulations and free energy calculations of base flipping in dsRNA.

Authors:  Katarina Hart; Boel Nyström; Marie Ohman; Lennart Nilsson
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

Review 6.  Control of ADAR1 editing of hepatitis delta virus RNAs.

Authors:  John L Casey
Journal:  Curr Top Microbiol Immunol       Date:  2012       Impact factor: 4.291

7.  The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.

Authors:  Michael C Washburn; Boyko Kakaradov; Balaji Sundararaman; Emily Wheeler; Shawn Hoon; Gene W Yeo; Heather A Hundley
Journal:  Cell Rep       Date:  2014-02-06       Impact factor: 9.423

8.  Evidence for auto-inhibition by the N terminus of hADAR2 and activation by dsRNA binding.

Authors:  Mark R Macbeth; Arunth T Lingam; Brenda L Bass
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

9.  An ADAR that edits transcripts encoding ion channel subunits functions as a dimer.

Authors:  Angela Gallo; Liam P Keegan; Gillian M Ring; Mary A O'Connell
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

Review 10.  Effects of length and location on the cellular response to double-stranded RNA.

Authors:  Qiaoqiao Wang; Gordon G Carmichael
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.