Literature DB >> 16672459

Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation.

Masaki Shintani1, Hirokazu Yano, Hiroshi Habe, Toshio Omori, Hisakazu Yamane, Masataka Tsuda, Hideaki Nojiri.   

Abstract

Isolated from Pseudomonas resinovorans CA10, pCAR1 is a 199-kb plasmid that carries genes involved in the degradation of carbazole and dioxin. The nucleotide sequence of pCAR1 has been determined previously. In this study, we characterized pCAR1 in terms of its replication, maintenance, and conjugation. By constructing miniplasmids of pCAR1 and testing their establishment in Pseudomonas putida DS1, we show that pCAR1 replication is due to the repA gene and its upstream DNA region. The repA gene and putative oriV region could be separated in P. putida DS1, and the oriV region was determined to be located within the 345-bp region between the repA and parW genes. Incompatibility testing using the minireplicon of pCAR1 and IncP plasmids indicated that pCAR1 belongs to the IncP-7 group. Monitoring of the maintenance properties of serial miniplasmids in nonselective medium, and mutation and complementation analyses of the parWABC genes, showed that the stability of pCAR1 is attributable to the products of the parWAB genes. In mating assays, the transfer of pCAR1 from CA10 was detected in a CA10 derivative that was cured of pCAR1 (CA10dm4) and in P. putida KT2440 at frequencies of 3 x 10(-1) and 3 x 10(-3) per donor strain, respectively. This is the first report of the characterization of this completely sequenced IncP-7 plasmid.

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Year:  2006        PMID: 16672459      PMCID: PMC1472330          DOI: 10.1128/AEM.72.5.3206-3216.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  63 in total

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Authors:  H Habe; J S Chung; J H Lee; K Kasuga; T Yoshida; H Nojiri; T Omori
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Authors:  N W Dunn; I C Gunsalus
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Authors:  R W Hedges; G A Jacoby
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Authors:  H Nojiri; H Sekiguchi; K Maeda; M Urata; S Nakai; T Yoshida; H Habe; T Omori
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

7.  Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteria.

Authors:  Masaki Shintani; Takako Yoshida; Hiroshi Habe; Toshio Omori; Hideaki Nojiri
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10.  New mini-Tn5 derivatives for insertion mutagenesis and genetic engineering in gram-negative bacteria.

Authors:  M F Alexeyev; I N Shokolenko; T P Croughan
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  21 in total

1.  Transcriptome analysis of Pseudomonas putida KT2440 harboring the completely sequenced IncP-7 plasmid pCAR1.

Authors:  Masatoshi Miyakoshi; Masaki Shintani; Tsuguno Terabayashi; Satoshi Kai; Hisakazu Yamane; Hideaki Nojiri
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

2.  Region-specific insertion of transposons in combination with selection for high plasmid transferability and stability accounts for the structural similarity of IncP-1 plasmids.

Authors:  Masahiro Sota; Masataka Tsuda; Hirokazu Yano; Haruo Suzuki; Larry J Forney; Eva M Top
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

3.  The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole.

Authors:  Masaki Shintani; Masaaki Urata; Kengo Inoue; Kaori Eto; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Hideaki Nojiri
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

4.  Complete sequence and organization of the Sphingobium chungbukense DJ77 pSY2 plasmid.

Authors:  Sun-Mi Yeon; Young-Chang Kim
Journal:  J Microbiol       Date:  2011-09-02       Impact factor: 3.422

5.  Effects of three different nucleoid-associated proteins encoded on IncP-7 plasmid pCAR1 on host Pseudomonas putida KT2440.

Authors:  Chiho Suzuki-Minakuchi; Ryusuke Hirotani; Masaki Shintani; Toshiharu Takeda; Yurika Takahashi; Kazuhiro Matsui; Delyana Vasileva; Choong-Soo Yun; Kazunori Okada; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2015-02-13       Impact factor: 4.792

6.  Complete nucleotide sequence of TOL plasmid pDK1 provides evidence for evolutionary history of IncP-7 catabolic plasmids.

Authors:  Hirokazu Yano; Masatoshi Miyakoshi; Kenshiro Ohshima; Michiro Tabata; Yuji Nagata; Masahira Hattori; Masataka Tsuda
Journal:  J Bacteriol       Date:  2010-06-25       Impact factor: 3.490

7.  Isolation and characterization of dibenzofuran-degrading Serratia marcescens from alkalophilic bacterial consortium of the chemostat.

Authors:  Prashant Kumar Jaiswal; Indu Shekhar Thakur
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8.  MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently.

Authors:  Choong-Soo Yun; Yurika Takahashi; Masaki Shintani; Toshiharu Takeda; Chiho Suzuki-Minakuchi; Kazunori Okada; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2015-11-20       Impact factor: 4.792

9.  Carbazole-degradative IncP-7 plasmid pCAR1.2 is structurally unstable in Pseudomonas fluorescens Pf0-1, which accumulates catechol, the intermediate of the carbazole degradation pathway.

Authors:  Yurika Takahashi; Masaki Shintani; Li Li; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

10.  Single-cell analyses revealed transfer ranges of IncP-1, IncP-7, and IncP-9 plasmids in a soil bacterial community.

Authors:  Masaki Shintani; Kazuhiro Matsui; Jun-Ichi Inoue; Akira Hosoyama; Shoko Ohji; Atsushi Yamazoe; Hideaki Nojiri; Kazuhide Kimbara; Moriya Ohkuma
Journal:  Appl Environ Microbiol       Date:  2013-10-18       Impact factor: 4.792

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