Literature DB >> 15856217

Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteria.

Masaki Shintani1, Takako Yoshida, Hiroshi Habe, Toshio Omori, Hideaki Nojiri.   

Abstract

The carbazole-catabolic plasmid pCAR1 isolated from Pseudomonas resinovorans strain CA10 was sequenced in its entirety; and it was found that pCAR1 carries the class II transposon Tn4676 containing carbazole-degradative genes. In this study, a new plasmid designated pCAR2 was isolated from P. putida strain HS01 that was a transconjugant from mating between the carbazole-degrader Pseudomonas sp. strain K23 and P. putida strain DS1. Southern hybridization and nucleotide sequence analysis of pCAR1 and pCAR2 revealed that the whole backbone structure was very similar in each. Plasmid pCAR2 was self-transmissible, because it was transferred from strain HS01 to P. fluorescens strain IAM12022 at the frequency of 2 x 10(-7) per recipient cell. After the serial transfer of strain HS01 on rich medium, we detected the transposition of Tn4676 from pCAR2 to the HS01 chromosome. The chromosome-located copy of Tn4676 was flanked by a 6-bp target duplication, 5'-AACATC-3'. These results experimentally demonstrated the transferability of pCAR2 and the functionality of Tn4676 on pCAR2. It was clearly shown that plasmid pCAR2 and transposon Tn4676 are active mobile genetic elements that can mediate the horizontal transfer of genes for the catabolism of carbazole.

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Year:  2004        PMID: 15856217     DOI: 10.1007/s00253-004-1778-0

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  10 in total

1.  Transcriptome analysis of Pseudomonas putida KT2440 harboring the completely sequenced IncP-7 plasmid pCAR1.

Authors:  Masatoshi Miyakoshi; Masaki Shintani; Tsuguno Terabayashi; Satoshi Kai; Hisakazu Yamane; Hideaki Nojiri
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

2.  The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole.

Authors:  Masaki Shintani; Masaaki Urata; Kengo Inoue; Kaori Eto; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Hideaki Nojiri
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

3.  Effects of three different nucleoid-associated proteins encoded on IncP-7 plasmid pCAR1 on host Pseudomonas putida KT2440.

Authors:  Chiho Suzuki-Minakuchi; Ryusuke Hirotani; Masaki Shintani; Toshiharu Takeda; Yurika Takahashi; Kazuhiro Matsui; Delyana Vasileva; Choong-Soo Yun; Kazunori Okada; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2015-02-13       Impact factor: 4.792

4.  Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation.

Authors:  Masaki Shintani; Hirokazu Yano; Hiroshi Habe; Toshio Omori; Hisakazu Yamane; Masataka Tsuda; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

5.  Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function.

Authors:  Choong-Soo Yun; Chiho Suzuki; Kunihiko Naito; Toshiharu Takeda; Yurika Takahashi; Fumiya Sai; Tsuguno Terabayashi; Masatoshi Miyakoshi; Masaki Shintani; Hiromi Nishida; Hisakazu Yamane; Hideaki Nojiri
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

6.  Carbazole-degradative IncP-7 plasmid pCAR1.2 is structurally unstable in Pseudomonas fluorescens Pf0-1, which accumulates catechol, the intermediate of the carbazole degradation pathway.

Authors:  Yurika Takahashi; Masaki Shintani; Li Li; Hisakazu Yamane; Hideaki Nojiri
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

7.  Single-cell analyses revealed transfer ranges of IncP-1, IncP-7, and IncP-9 plasmids in a soil bacterial community.

Authors:  Masaki Shintani; Kazuhiro Matsui; Jun-Ichi Inoue; Akira Hosoyama; Shoko Ohji; Atsushi Yamazoe; Hideaki Nojiri; Kazuhide Kimbara; Moriya Ohkuma
Journal:  Appl Environ Microbiol       Date:  2013-10-18       Impact factor: 4.792

8.  Differential regulation of BK channels by fragile X mental retardation protein.

Authors:  Aravind Kshatri; Alejandro Cerrada; Roger Gimeno; David Bartolomé-Martín; Patricio Rojas; Teresa Giraldez
Journal:  J Gen Physiol       Date:  2020-06-01       Impact factor: 4.086

9.  High-resolution mapping of plasmid transcriptomes in different host bacteria.

Authors:  Masatoshi Miyakoshi; Hiromi Nishida; Masaki Shintani; Hisakazu Yamane; Hideaki Nojiri
Journal:  BMC Genomics       Date:  2009-01-09       Impact factor: 3.969

10.  Different transferability of incompatibility (Inc) P-7 plasmid pCAR1 and IncP-1 plasmid pBP136 in stirring liquid conditions.

Authors:  Shunsuke Nakazawa; Akira Haramiishi; Kohei Fukuda; Yukie Kanayama; Toshinori Watanabe; Masahiro Yuki; Moriya Ohkuma; Kazuhiro Takeda; Kazuhide Kimbara; Masaki Shintani
Journal:  PLoS One       Date:  2017-10-12       Impact factor: 3.240

  10 in total

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