Literature DB >> 16669656

Genome mining in Streptomyces coelicolor: molecular cloning and characterization of a new sesquiterpene synthase.

Xin Lin1, Russell Hopson, David E Cane.   

Abstract

The terpene synthase encoded by the SCO5222 (SC7E4.19) gene of Streptomyces coelicolor was cloned by PCR and expressed in Escherichia coli as an N-terminal-His6-tag protein. Incubation of the recombinant protein, SCO5222p, with farnesyl diphosphate (1, FPP) in the presence of Mg(II) gave a new sesquiterpene, (+)-epi-isozizaene (2), whose structure and stereochemistry were determined by a combination of 1H, 13C, COSY, HMQC, HMBC, and NOESY NMR. The steady-state kinetic parameters were kcat 0.049 +/- 0.001 s-1 and a Km (FPP) of 147 +/- 14 nM. Individual incubations of recombinant epi-isozizaene synthase with [1,1-2H2]FPP (1a), (1R)-[1-2H]-FPP (1b), and (1S)-[1-2H]-FPP (1c) and NMR analysis of the resulting deuterated epi-isozizaenes supported an isomerization-cyclization-rearrangement mechanism involving the intermediacy of (3R)-nerolidyl diphosphate (3).

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Year:  2006        PMID: 16669656      PMCID: PMC2533732          DOI: 10.1021/ja061292s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

Review 1.  Forty years of genetics with Streptomyces: from in vivo through in vitro to in silico.

Authors:  David A Hopwood
Journal:  Microbiology       Date:  1999-09       Impact factor: 2.777

2.  Crystal structure of pentalenene synthase: mechanistic insights on terpenoid cyclization reactions in biology.

Authors:  C A Lesburg; G Zhai; D E Cane; D W Christianson
Journal:  Science       Date:  1997-09-19       Impact factor: 47.728

3.  A gene cluster for biosynthesis of the sesquiterpenoid antibiotic pentalenolactone in Streptomyces avermitilis.

Authors:  Charles N Tetzlaff; Zheng You; David E Cane; Satoshi Takamatsu; Satoshi Omura; Haruo Ikeda
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

Review 4.  Primary metabolism and its control in streptomycetes: a most unusual group of bacteria.

Authors:  D A Hodgson
Journal:  Adv Microb Physiol       Date:  2000       Impact factor: 3.517

5.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

6.  Pentalenene synthase. Purification, molecular cloning, sequencing, and high-level expression in Escherichia coli of a terpenoid cyclase from Streptomyces UC5319.

Authors:  D E Cane; J K Sohng; C R Lamberson; S M Rudnicki; Z Wu; M D Lloyd; J S Oliver; B R Hubbard
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

7.  Albaflavenone, a sesquiterpene ketone with a zizaene skeleton produced by a streptomycete with a new rope morphology.

Authors:  H Gürtler; R Pedersen; U Anthoni; C Christophersen; P H Nielsen; E M Wellington; C Pedersen; K Bock
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Authors:  David E Cane; Rory M Watt
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-29       Impact factor: 11.205

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Authors:  Xiaofei He; David E Cane
Journal:  J Am Chem Soc       Date:  2004-03-10       Impact factor: 15.419

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Authors:  Bertolt Gust; Greg L Challis; Kay Fowler; Tobias Kieser; Keith F Chater
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-31       Impact factor: 11.205

  10 in total
  40 in total

1.  Computational-guided discovery and characterization of a sesquiterpene synthase from Streptomyces clavuligerus.

Authors:  Jeng-Yeong Chow; Bo-Xue Tian; Gurusankar Ramamoorthy; Brandan S Hillerich; Ronald D Seidel; Steven C Almo; Matthew P Jacobson; C Dale Poulter
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-21       Impact factor: 11.205

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3.  Crystal structure of albaflavenone monooxygenase containing a moonlighting terpene synthase active site.

Authors:  Bin Zhao; Li Lei; Dmitry G Vassylyev; Xin Lin; David E Cane; Steven L Kelly; Hang Yuan; David C Lamb; Michael R Waterman
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Review 4.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

5.  Albaflavenoid, a new tricyclic sesquiterpenoid from Streptomyces violascens.

Authors:  Dan Zheng; Nan Ding; Yi Jiang; Jiaoyue Zhang; Jian Ma; Xiu Chen; Jiang Liu; Li Han; Xueshi Huang
Journal:  J Antibiot (Tokyo)       Date:  2016-02-24       Impact factor: 2.649

6.  Crystal structure of F95Q epi-isozizaene synthase, an engineered sesquiterpene cyclase that generates biofuel precursors β- and γ-curcumene.

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7.  Trinuclear Metal Clusters in Catalysis by Terpenoid Synthases.

Authors:  Julie A Aaron; David W Christianson
Journal:  Pure Appl Chem       Date:  2010       Impact factor: 2.453

Review 8.  Exploitation of the Streptomyces coelicolor A3(2) genome sequence for discovery of new natural products and biosynthetic pathways.

Authors:  Gregory L Challis
Journal:  J Ind Microbiol Biotechnol       Date:  2013-12-10       Impact factor: 3.346

9.  Biochemistry and molecular genetics of the biosynthesis of the earthy odorant methylisoborneol in Streptomyces coelicolor.

Authors:  Chieh-Mei Wang; David E Cane
Journal:  J Am Chem Soc       Date:  2008-06-19       Impact factor: 15.419

10.  Biosynthesis of the sesquiterpene antibiotic albaflavenone in Streptomyces coelicolor. Mechanism and stereochemistry of the enzymatic formation of epi-isozizaene.

Authors:  Xin Lin; David E Cane
Journal:  J Am Chem Soc       Date:  2009-05-13       Impact factor: 15.419

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