Literature DB >> 19858213

Crystal structure of albaflavenone monooxygenase containing a moonlighting terpene synthase active site.

Bin Zhao1, Li Lei2, Dmitry G Vassylyev3, Xin Lin4, David E Cane4, Steven L Kelly5, Hang Yuan2, David C Lamb5, Michael R Waterman2.   

Abstract

Albaflavenone synthase (CYP170A1) is a monooxygenase catalyzing the final two steps in the biosynthesis of this antibiotic in the soil bacterium, Streptomyces coelicolor A3(2). Interestingly, CYP170A1 shows no stereo selection forming equal amounts of two albaflavenol epimers, each of which is oxidized in turn to albaflavenone. To explore the structural basis of the reaction mechanism, we have studied the crystal structures of both ligand-free CYP170A1 (2.6 A) and complex of endogenous substrate (epi-isozizaene) with CYP170A1 (3.3 A). The structure of the complex suggests that the proximal epi-isozizaene molecules may bind to the heme iron in two orientations. In addition, much to our surprise, we have found that albaflavenone synthase also has a second, completely distinct catalytic activity corresponding to the synthesis of farnesene isomers from farnesyl diphosphate. Within the cytochrome P450 alpha-helical domain both the primary sequence and x-ray structure indicate the presence of a novel terpene synthase active site that is moonlighting on the P450 structure. This includes signature sequences for divalent cation binding and an alpha-helical barrel. This barrel is unusual because it consists of only four helices rather than six found in all other terpene synthases. Mutagenesis establishes that this barrel is essential for the terpene synthase activity of CYP170A1 but not for the monooxygenase activity. This is the first bifunctional P450 discovered to have another active site moonlighting on it and the first time a terpene synthase active site is found moonlighting on another protein.

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Year:  2009        PMID: 19858213      PMCID: PMC2794785          DOI: 10.1074/jbc.M109.064683

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

Review 1.  Enzymes with extra talents: moonlighting functions and catalytic promiscuity.

Authors:  Shelley D Copley
Journal:  Curr Opin Chem Biol       Date:  2003-04       Impact factor: 8.822

Review 2.  Bifunctional and moonlighting enzymes: lighting the way to regulatory control.

Authors:  Brandon d Moore
Journal:  Trends Plant Sci       Date:  2004-05       Impact factor: 18.313

3.  The cytochrome P450 gene family CYP157 does not contain EXXR in the K-helix reducing the absolute conserved P450 residues to a single cysteine.

Authors:  Sanjeewa Rupasinghe; Mary A Schuler; Norio Kagawa; Hang Yuan; Li Lei; Bin Zhao; Steven L Kelly; Michael R Waterman; David C Lamb
Journal:  FEBS Lett       Date:  2006-10-30       Impact factor: 4.124

4.  Isolation and identification of allelochemicals that attract the larval parasitoid,Cotesia marginiventris (Cresson), to the microhabitat of one of its hosts.

Authors:  T C Turlings; J H Tumlinson; R R Heath; A T Proveaux; R E Doolittle
Journal:  J Chem Ecol       Date:  1991-11       Impact factor: 2.626

5.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

6.  Aliphatic hydroxylation by highly purified liver microsomal cytochrome P-450. Evidence for a carbon radical intermediate.

Authors:  J T Groves; G A McClusky
Journal:  Biochem Biophys Res Commun       Date:  1978-03-15       Impact factor: 3.575

Review 7.  P450 superfamily: update on new sequences, gene mapping, accession numbers and nomenclature.

Authors:  D R Nelson; L Koymans; T Kamataki; J J Stegeman; R Feyereisen; D J Waxman; M R Waterman; O Gotoh; M J Coon; R W Estabrook; I C Gunsalus; D W Nebert
Journal:  Pharmacogenetics       Date:  1996-02

8.  Structure and NTPase activity of the RNA-translocating protein (P4) of bacteriophage phi 6.

Authors:  J T Juuti; D H Bamford; R Tuma; G J Thomas
Journal:  J Mol Biol       Date:  1998-06-05       Impact factor: 5.469

9.  Trans-beta-farnesene as a feeding stimulant for the sand fly Lutzomyia longipalpis (Diptera: Psychodidae).

Authors:  R B Tesh; H Guzman; M L Wilson
Journal:  J Med Entomol       Date:  1992-03       Impact factor: 2.278

10.  Identification of sesquiterpene synthases from Nostoc punctiforme PCC 73102 and Nostoc sp. strain PCC 7120.

Authors:  Sean A Agger; Fernando Lopez-Gallego; Thomas R Hoye; Claudia Schmidt-Dannert
Journal:  J Bacteriol       Date:  2008-07-25       Impact factor: 3.490

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  34 in total

Review 1.  An evolutionary perspective on protein moonlighting.

Authors:  Shelley D Copley
Journal:  Biochem Soc Trans       Date:  2014-12       Impact factor: 5.407

Review 2.  Conformational plasticity and structure/function relationships in cytochromes P450.

Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

3.  Cyclization of a cellular dipentaenone by Streptomyces coelicolor cytochrome P450 154A1 without oxidation/reduction.

Authors:  Qian Cheng; David C Lamb; Steven L Kelly; Li Lei; F Peter Guengerich
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4.  Classification of ligand molecules in PDB with graph match-based structural superposition.

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Journal:  J Struct Funct Genomics       Date:  2016-12-23

Review 5.  An overview of the cytochrome P450 enzymes that catalyze the same-site multistep oxidation reactions in biotechnologically relevant selected actinomycete strains.

Authors:  Yohei Iizaka; David H Sherman; Yojiro Anzai
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-12       Impact factor: 4.813

Review 6.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

Review 7.  Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?

Authors:  Steven L Kelly; Diane E Kelly
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-06       Impact factor: 6.237

Review 8.  Unusual properties of the cytochrome P450 superfamily.

Authors:  David C Lamb; Michael R Waterman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-06       Impact factor: 6.237

Review 9.  Cytochromes P450 for natural product biosynthesis in Streptomyces: sequence, structure, and function.

Authors:  Jeffrey D Rudolf; Chin-Yuan Chang; Ming Ma; Ben Shen
Journal:  Nat Prod Rep       Date:  2017-08-30       Impact factor: 13.423

10.  The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism.

Authors:  Lian Duan; Gerwald Jogl; David E Cane
Journal:  J Am Chem Soc       Date:  2016-09-16       Impact factor: 15.419

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