Literature DB >> 16642038

Repair deficient mice reveal mABH2 as the primary oxidative demethylase for repairing 1meA and 3meC lesions in DNA.

Jeanette Ringvoll1, Line M Nordstrand, Cathrine B Vågbø, Vivi Talstad, Karen Reite, Per Arne Aas, Knut H Lauritzen, Nina Beate Liabakk, Alexandra Bjørk, Richard William Doughty, Pål Ø Falnes, Hans E Krokan, Arne Klungland.   

Abstract

Two human homologs of the Escherichia coli AlkB protein, denoted hABH2 and hABH3, were recently shown to directly reverse 1-methyladenine (1meA) and 3-methylcytosine (3meC) damages in DNA. We demonstrate that mice lacking functional mABH2 or mABH3 genes, or both, are viable and without overt phenotypes. Neither were histopathological changes observed in the gene-targeted mice. However, in the absence of any exogenous exposure to methylating agents, mice lacking mABH2, but not mABH3 defective mice, accumulate significant levels of 1meA in the genome, suggesting the presence of a biologically relevant endogenous source of methylating agent. Furthermore, embryonal fibroblasts from mABH2-deficient mice are unable to remove methyl methane sulfate (MMS)-induced 1meA from genomic DNA and display increased cytotoxicity after MMS exposure. In agreement with these results, we found that in vitro repair of 1meA and 3meC in double-stranded DNA by nuclear extracts depended primarily, if not solely, on mABH2. Our data suggest that mABH2 and mABH3 have different roles in the defense against alkylating agents.

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Year:  2006        PMID: 16642038      PMCID: PMC1462979          DOI: 10.1038/sj.emboj.7601109

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  44 in total

1.  AlkB reverses etheno DNA lesions caused by lipid oxidation in vitro and in vivo.

Authors:  James C Delaney; Lisa Smeester; Cintyu Wong; Lauren E Frick; Koli Taghizadeh; John S Wishnok; Catherine L Drennan; Leona D Samson; John M Essigmann
Journal:  Nat Struct Mol Biol       Date:  2005-10-02       Impact factor: 15.369

2.  Structure-function analysis of phytanoyl-CoA 2-hydroxylase mutations causing Refsum's disease.

Authors:  M Mukherji; W Chien; N J Kershaw; I J Clifton; C J Schofield; A S Wierzbicki; M D Lloyd
Journal:  Hum Mol Genet       Date:  2001-09-01       Impact factor: 6.150

Review 3.  Evaluating mutant mice: anatomic pathology.

Authors:  C Brayton; M Justice; C A Montgomery
Journal:  Vet Pathol       Date:  2001-01       Impact factor: 2.221

4.  Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage.

Authors:  A Klungland; I Rosewell; S Hollenbach; E Larsen; G Daly; B Epe; E Seeberg; T Lindahl; D E Barnes
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

5.  Defective processing of methylated single-stranded DNA by E. coli AlkB mutants.

Authors:  S Dinglay; S C Trewick; T Lindahl; B Sedgwick
Journal:  Genes Dev       Date:  2000-08-15       Impact factor: 11.361

6.  Repair of 3-methylthymine and 1-methylguanine lesions by bacterial and human AlkB proteins.

Authors:  Pål Ø Falnes
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

7.  Characterization of homologous recombination induced by replication inhibition in mammalian cells.

Authors:  Y Saintigny; F Delacôte; G Varès; F Petitot; S Lambert; D Averbeck; B S Lopez
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

8.  Nonenzymatic methylation of DNA by S-adenosylmethionine in vitro.

Authors:  L R Barrows; P N Magee
Journal:  Carcinogenesis       Date:  1982       Impact factor: 4.944

9.  Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB.

Authors:  Bomina Yu; William C Edstrom; Jordi Benach; Yoshitomo Hamuro; Patricia C Weber; Brian R Gibney; John F Hunt
Journal:  Nature       Date:  2006-02-16       Impact factor: 49.962

10.  The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases.

Authors:  L Aravind; E V Koonin
Journal:  Genome Biol       Date:  2001-02-19       Impact factor: 13.583

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  81 in total

1.  Direct repair of 3,N(4)-ethenocytosine by the human ALKBH2 dioxygenase is blocked by the AAG/MPG glycosylase.

Authors:  Dragony Fu; Leona D Samson
Journal:  DNA Repair (Amst)       Date:  2011-11-11

2.  X-ray absorption spectroscopy structural investigation of early intermediates in the mechanism of DNA repair by human ABH2.

Authors:  Nitai Charan Giri; Hong Sun; Haobin Chen; Max Costa; Michael J Maroney
Journal:  Biochemistry       Date:  2011-05-11       Impact factor: 3.162

Review 3.  A loop matters for FTO substrate selection.

Authors:  Zhifu Han; Ning Huang; Tianhui Niu; Jijie Chai
Journal:  Protein Cell       Date:  2010-07-29       Impact factor: 14.870

Review 4.  Haploinsufficiency in mouse models of DNA repair deficiency: modifiers of penetrance.

Authors:  Diane C Cabelof
Journal:  Cell Mol Life Sci       Date:  2011-09-28       Impact factor: 9.261

5.  ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNA.

Authors:  Erwin van den Born; Cathrine B Vågbø; Lene Songe-Møller; Vibeke Leihne; Guro F Lien; Grazyna Leszczynska; Andrzej Malkiewicz; Hans E Krokan; Finn Kirpekar; Arne Klungland; Pål Ø Falnes
Journal:  Nat Commun       Date:  2011-02-01       Impact factor: 14.919

Review 6.  DNA-damage repair; the good, the bad, and the ugly.

Authors:  Razqallah Hakem
Journal:  EMBO J       Date:  2008-02-20       Impact factor: 11.598

7.  The DNA repair protein ALKBH2 mediates temozolomide resistance in human glioblastoma cells.

Authors:  Tor-Christian Aase Johannessen; Lars Prestegarden; Amra Grudic; Monika E Hegi; Berit Bølge Tysnes; Rolf Bjerkvig
Journal:  Neuro Oncol       Date:  2012-12-20       Impact factor: 12.300

Review 8.  Breathing-in epigenetic change with vitamin C.

Authors:  Asun Monfort; Anton Wutz
Journal:  EMBO Rep       Date:  2013-03-15       Impact factor: 8.807

9.  Fe(II)/alpha-ketoglutarate hydroxylases involved in nucleobase, nucleoside, nucleotide, and chromatin metabolism.

Authors:  Jana M Simmons; Tina A Müller; Robert P Hausinger
Journal:  Dalton Trans       Date:  2008-06-27       Impact factor: 4.390

Review 10.  Damage detection and base flipping in direct DNA alkylation repair.

Authors:  Cai-Guang Yang; Kristel Garcia; Chuan He
Journal:  Chembiochem       Date:  2009-02-13       Impact factor: 3.164

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