Literature DB >> 16606235

Volume-exclusion effects in tethered-particle experiments: bead size matters.

Darren E Segall1, Philip C Nelson, Rob Phillips.   

Abstract

We give a theoretical analysis of bead motion in tethered-particle experiments, a single-molecule technique that has been used to explore the dynamics of a variety of macromolecules of biological interest. Our analysis reveals that the proximity of the tethered bead to a nearby surface gives rise to a volume-exclusion effect, resulting in an entropic stretching-force on the molecule that changes its statistical properties. In addition, volume exclusion brings about intriguing scaling relations between key observables (statistical moments of the bead) and parameters such as bead size and contour length of the molecule. We present analytic and numerical results for these effects in both flexible and semiflexible tethers. Finally, our results give a precise, experimentally testable prediction for the probability distribution of the bead center measured from the polymer attachment point.

Entities:  

Mesh:

Year:  2006        PMID: 16606235      PMCID: PMC3261840          DOI: 10.1103/PhysRevLett.96.088306

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

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  56 in total

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9.  Probing a label-free local bend in DNA by single molecule tethered particle motion.

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