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Literature DB >> 16597893

Microevolution of the direct repeat locus of Mycobacterium tuberculosis in a strain prevalent in San Francisco.

Roxanne S Aga¹, Elizabeth Fair, Neil F Abernethy, Kathryn Deriemer, E Antonio Paz, L Masae Kawamura, Peter M Small, Midori Kato-Maeda.

Abstract

We describe a microevolutionary event of a prevalent strain of Mycobacterium tuberculosis that caused two outbreaks in San Francisco. During the second outbreak, a direct variable repeat was lost. We discuss the mechanisms of this change and the implications of analyzing multiple genetic loci in this context.

Entities: Species

Mesh：

Substances：
DNA, Bacterial

Year: 2006 PMID： 16597893 PMCID： PMC1448666 DOI： 10.1128/JCM.44.4.1558-1560.2006

Source DB: PubMed Journal: J Clin Microbiol ISSN： 0095-1137 Impact factor: 5.948

14 in total

1. Characterization of Mycobacterium tuberculosis isolates from patients in Houston, Texas, by spoligotyping.

Authors: H Soini; X Pan; A Amin; E A Graviss; A Siddiqui; J M Musser
Journal: J Clin Microbiol Date: 2000-02 Impact factor: 5.948

2. Neutral microepidemic evolution of bacterial pathogens.

Authors: Christophe Fraser; William P Hanage; Brian G Spratt
Journal: Proc Natl Acad Sci U S A Date: 2005-01-31 Impact factor: 11.205

3. IS6110 transposition and evolutionary scenario of the direct repeat locus in a group of closely related Mycobacterium tuberculosis strains.

Authors: Z Fang; N Morrison; B Watt; C Doig; K J Forbes
Journal: J Bacteriol Date: 1998-04 Impact factor: 3.490

4. A molecular epidemiologic analysis of tuberculosis trends in San Francisco, 1991-1997.

Authors: R M Jasmer; J A Hahn; P M Small; C L Daley; M A Behr; A R Moss; J M Creasman; G F Schecter; E A Paz; P C Hopewell
Journal: Ann Intern Med Date: 1999-06-15 Impact factor: 25.391

5. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology.

Authors: J Kamerbeek; L Schouls; A Kolk; M van Agterveld; D van Soolingen; S Kuijper; A Bunschoten; H Molhuizen; R Shaw; M Goyal; J van Embden
Journal: J Clin Microbiol Date: 1997-04 Impact factor: 5.948

6. Use of multiple markers in population-based molecular epidemiologic studies of tuberculosis.

Authors: J T Rhee; M M Tanaka; M A Behr; C B Agasino; E A Paz; P C Hopewell; P M Small
Journal: Int J Tuberc Lung Dis Date: 2000-12 Impact factor: 2.373

7. Microevolution of the direct repeat region of Mycobacterium tuberculosis: implications for interpretation of spoligotyping data.

Authors: R M Warren; E M Streicher; S L Sampson; G D van der Spuy; M Richardson; D Nguyen; M A Behr; T C Victor; P D van Helden
Journal: J Clin Microbiol Date: 2002-12 Impact factor: 5.948

8. Polyclonal and compartmentalized infection by Mycobacterium tuberculosis in patients with both respiratory and extrarespiratory involvement.

Authors: Darío García de Viedma; Mercedes Marín; María Jesús Ruiz Serrano; Luis Alcalá; Emilio Bouza
Journal: J Infect Dis Date: 2003-02-07 Impact factor: 5.226

9. Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study.

Authors: Ingrid Filliol; Jeffrey R Driscoll; Dick van Soolingen; Barry N Kreiswirth; Kristin Kremer; Georges Valétudie; Duc Anh Dang; Rachael Barlow; Dilip Banerjee; Pablo J Bifani; Karine Brudey; Angel Cataldi; Robert C Cooksey; Debby V Cousins; Jeremy W Dale; Odir A Dellagostin; Francis Drobniewski; Guido Engelmann; Séverine Ferdinand; Deborah Gascoyne-Binzi; Max Gordon; M Cristina Gutierrez; Walter H Haas; Herre Heersma; Eric Kassa-Kelembho; Minh Ly Ho; Athanasios Makristathis; Caterina Mammina; Gerald Martin; Peter Moström; Igor Mokrousov; Valérie Narbonne; Olga Narvskaya; Antonino Nastasi; Sara Ngo Niobe-Eyangoh; Jean W Pape; Voahangy Rasolofo-Razanamparany; Malin Ridell; M Lucia Rossetti; Fritz Stauffer; Philip N Suffys; Howard Takiff; Jeanne Texier-Maugein; Véronique Vincent; Jacobus H de Waard; Christophe Sola; Nalin Rastogi
Journal: J Clin Microbiol Date: 2003-05 Impact factor: 5.948

10. Analysis of clonal composition of Mycobacterium tuberculosis isolates in primary infections in children.

Authors: Darío García de Viedma; Mercedes Marín; María Jesús Ruiz; Emilio Bouza
Journal: J Clin Microbiol Date: 2004-08 Impact factor: 5.948

6 in total

1. Systematic survey of clonal complexity in tuberculosis at a populational level and detailed characterization of the isolates involved.

Authors: Yurena Navarro; Marta Herranz; Laura Pérez-Lago; Miguel Martínez Lirola; Maria Jesús Ruiz-Serrano; Emilio Bouza; Darío García de Viedma
Journal: J Clin Microbiol Date: 2011-09-28 Impact factor: 5.948

2. Spoligotype signatures in the Mycobacterium tuberculosis complex.

Authors: E M Streicher; T C Victor; G van der Spuy; C Sola; N Rastogi; P D van Helden; R M Warren
Journal: J Clin Microbiol Date: 2006-10-25 Impact factor: 5.948

3. Epidemiologic consequences of microvariation in Mycobacterium tuberculosis.

Authors: Barun Mathema; Natalia Kurepina; Guibin Yang; Elena Shashkina; Claudia Manca; Carolina Mehaffy; Helle Bielefeldt-Ohmann; Shama Ahuja; Dorothy A Fallows; Angelo Izzo; Pablo Bifani; Karen Dobos; Gilla Kaplan; Barry N Kreiswirth
Journal: J Infect Dis Date: 2012-02-07 Impact factor: 5.226