Literature DB >> 17065260

Spoligotype signatures in the Mycobacterium tuberculosis complex.

E M Streicher1, T C Victor, G van der Spuy, C Sola, N Rastogi, P D van Helden, R M Warren.   

Abstract

Evolution of the direct repeat region in Mycobacterium tuberculosis has created unique spoligotype signatures specifically associated with IS6110-defined strain families. Spoligotyping signatures may enable the analysis of the strain population structure in different settings and will enable the rapid identification of strain families that acquire drug resistance or escape protective immunity in drug and vaccine trials.

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Year:  2006        PMID： 17065260      PMCID： PMC1828946          DOI： 10.1128/JCM.01429-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  37 in total

1.  Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination.

Authors:  S Sreevatsan; X Pan; K E Stockbauer; N D Connell; B N Kreiswirth; T S Whittam; J M Musser
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

2.  Insertion element IS987 from Mycobacterium bovis BCG is located in a hot-spot integration region for insertion elements in Mycobacterium tuberculosis complex strains.

Authors:  P W Hermans; D van Soolingen; E M Bik; P E de Haas; J W Dale; J D van Embden
Journal:  Infect Immun       Date:  1991-08       Impact factor: 3.441

3.  Rapid detection and simultaneous strain differentiation of Mycobacterium tuberculosis complex bacteria by spoligotyping.

Authors:  H O Molhuizen; A E Bunschoten; L M Schouls; J D van Embden
Journal:  Methods Mol Biol       Date:  1998

4.  Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

Authors:  J D van Embden; M D Cave; J T Crawford; J W Dale; K D Eisenach; B Gicquel; P Hermans; C Martin; R McAdam; T M Shinnick
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

5.  Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology.

Authors:  J Kamerbeek; L Schouls; A Kolk; M van Agterveld; D van Soolingen; S Kuijper; A Bunschoten; H Molhuizen; R Shaw; M Goyal; J van Embden
Journal:  J Clin Microbiol       Date:  1997-04       Impact factor: 5.948

6.  Comparison of methods based on different molecular epidemiological markers for typing of Mycobacterium tuberculosis complex strains: interlaboratory study of discriminatory power and reproducibility.

Authors:  K Kremer; D van Soolingen; R Frothingham; W H Haas; P W Hermans; C Martín; P Palittapongarnpim; B B Plikaytis; L W Riley; M A Yakrus; J M Musser; J D van Embden
Journal:  J Clin Microbiol       Date:  1999-08       Impact factor: 5.948

7.  Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats.

Authors:  R Frothingham; W A Meeker-O'Connell
Journal:  Microbiology       Date:  1998-05       Impact factor: 2.777

8.  Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method.

Authors:  P M Groenen; A E Bunschoten; D van Soolingen; J D van Embden
Journal:  Mol Microbiol       Date:  1993-12       Impact factor: 3.501

9.  Analysis of the population structure of Mycobacterium tuberculosis in Ethiopia, Tunisia, and The Netherlands: usefulness of DNA typing for global tuberculosis epidemiology.

Authors:  P W Hermans; F Messadi; H Guebrexabher; D van Soolingen; P E de Haas; H Heersma; H de Neeling; A Ayoub; F Portaels; D Frommel
Journal:  J Infect Dis       Date:  1995-06       Impact factor: 5.226

10.  Diagnosis of Mycobacterium microti infections among humans by using novel genetic markers.

Authors:  D van Soolingen; A G van der Zanden; P E de Haas; G T Noordhoek; A Kiers; N A Foudraine; F Portaels; A H Kolk; K Kremer; J D van Embden
Journal:  J Clin Microbiol       Date:  1998-07       Impact factor: 5.948
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  50 in total

Review 1.  From Evolutionary Advantage to Disease Agents: Forensic Reevaluation of Host-Microbe Interactions and Pathogenicity.

Authors:  Jessica I Rivera-Pérez; Alfredo A González; Gary A Toranzos
Journal:  Microbiol Spectr       Date:  2017-01

2.  Replacing reverse line blot hybridization spoligotyping of the Mycobacterium tuberculosis complex.

Authors:  Christiane Honisch; Michael Mosko; Catherine Arnold; Saheer E Gharbia; Roland Diel; Stefan Niemann
Journal:  J Clin Microbiol       Date:  2010-03-03       Impact factor: 5.948

Review 3.  Exploring the usefulness of molecular epidemiology of tuberculosis in Africa: a systematic review.

Authors:  Bourahima Kone; Anou M Somboro; Jane L Holl; Bocar Baya; Antieme Acg Togo; Yeya Dit Sadio Sarro; Bassirou Diarra; Ousmane Kodio; Robert L Murphy; William Bishai; Mamoudou Maiga; Seydou Doumbia
Journal:  Int J Mol Epidemiol Genet       Date:  2020-06-15

4.  Epidemic spread of multidrug-resistant tuberculosis in Johannesburg, South Africa.

Authors:  Ben J Marais; Charmaine K Mlambo; Nalin Rastogi; Thierry Zozio; Adriano G Duse; Thomas C Victor; Else Marais; Robin M Warren
Journal:  J Clin Microbiol       Date:  2013-04-03       Impact factor: 5.948

5.  Differences between tuberculosis cases infected with Mycobacterium africanum, West African type 2, relative to Euro-American Mycobacterium tuberculosis: an update.

Authors:  Bouke C de Jong; Ifedayo Adetifa; Brigitte Walther; Philip C Hill; Martin Antonio; Martin Ota; Richard A Adegbola
Journal:  FEMS Immunol Med Microbiol       Date:  2009-11-03

6.  Mycobacterium tuberculosis ecology in Venezuela: epidemiologic correlates of common spoligotypes and a large clonal cluster defined by MIRU-VNTR-24.

Authors:  Edgar Abadía; Monica Sequera; Dagmarys Ortega; María Victoria Méndez; Arnelly Escalona; Omaira Da Mata; Elix Izarra; Yeimy Rojas; Rossana Jaspe; Alifiya S Motiwala; David Alland; Jacobus de Waard; Howard E Takiff
Journal:  BMC Infect Dis       Date:  2009-08-06       Impact factor: 3.090

7.  A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages.

Authors:  Minoo Aminian; Amina Shabbeer; Kristin P Bennett
Journal:  BMC Bioinformatics       Date:  2010-04-29       Impact factor: 3.169

Review 8.  Mycobacterium africanum--review of an important cause of human tuberculosis in West Africa.

Authors:  Bouke C de Jong; Martin Antonio; Sebastien Gagneux
Journal:  PLoS Negl Trop Dis       Date:  2010-09-28

9.  Putative compensatory mutations in the rpoC gene of rifampin-resistant Mycobacterium tuberculosis are associated with ongoing transmission.

Authors:  M de Vos; B Müller; S Borrell; P A Black; P D van Helden; R M Warren; S Gagneux; T C Victor
Journal:  Antimicrob Agents Chemother       Date:  2012-12-03       Impact factor: 5.191

10.  Evidence for a rapid rate of molecular evolution at the hypervariable and immunogenic Mycobacterium tuberculosis PPE38 gene region.

Authors:  Christopher R E McEvoy; Paul D van Helden; Robin M Warren; Nicolaas C Gey van Pittius
Journal:  BMC Evol Biol       Date:  2009-09-21       Impact factor: 3.260
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