Literature DB >> 16540543

Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase.

Jason D Sterling1, Melani A Atmodjo, Sarah E Inwood, V S Kumar Kolli, Heather F Quigley, Michael G Hahn, Debra Mohnen.   

Abstract

Galacturonosyltransferases (GalATs) are required for the synthesis of pectin, a family of complex polysaccharides present in the cell walls of all land plants. We report the identification of a pectin GalAT (GAUT1) using peptide sequences obtained from Arabidopsis thaliana proteins partially purified for homogalacturonan (HG) alpha-1,4-GalAT activity. Transient expression of GAUT1 cDNA in the human embryonic kidney cell line HEK293 yielded uridine diphosphogalacturonic acid:GalAT activity. Polyclonal antibodies generated against GAUT1 immunoabsorbed HG alpha-1,4-GalAT activity from Arabidopsis solubilized membrane proteins. blast analysis of the Arabidopsis genome identified a family of 25 genes with high sequence similarity to GAUT1 and homologous genes in other dicots, in rice, and in Physcomitrella. Sequence alignment and phylogenetic Bayesian analysis of the Arabidopsis GAUT1-related gene family separates them into four related clades of GAUT and GAUT-like genes that are distinct from the other Arabidopsis members of glycosyltransferase family 8. The identification of GAUT1 as a HG GalAT and of the GAUT1-related gene family provides the genetic and biochemical tools required to study the function of these genes in pectin synthesis.

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Year:  2006        PMID: 16540543      PMCID: PMC1458824          DOI: 10.1073/pnas.0600120103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

2.  Development of a filter assay for measuring homogalacturonan: alpha-(1,4)-Galacturonosyltransferase activity.

Authors:  Jason D Sterling; Jason A Lemons; Ivy F Forkner; Debra Mohnen
Journal:  Anal Biochem       Date:  2005-08-15       Impact factor: 3.365

3.  A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana.

Authors:  B Henrissat; P M Coutinho; G J Davies
Journal:  Plant Mol Biol       Date:  2001-09       Impact factor: 4.076

4.  The MUR1 gene of Arabidopsis thaliana encodes an isoform of GDP-D-mannose-4,6-dehydratase, catalyzing the first step in the de novo synthesis of GDP-L-fucose.

Authors:  C P Bonin; I Potter; G F Vanzin; W D Reiter
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-04       Impact factor: 11.205

5.  QUASIMODO1 is expressed in vascular tissue of Arabidopsis thaliana inflorescence stems, and affects homogalacturonan and xylan biosynthesis.

Authors:  Caroline Orfila; Susanne Oxenbøll Sørensen; Jesper Harholt; Naomi Geshi; Hazel Crombie; Hoai-Nam Truong; J S Grant Reid; J Paul Knox; Henrik Vibe Scheller
Journal:  Planta       Date:  2005-11-04       Impact factor: 4.116

6.  The biosynthesis of UDP-galacturonic acid in plants. Functional cloning and characterization of Arabidopsis UDP-D-glucuronic acid 4-epimerase.

Authors:  Xiaogang Gu; Maor Bar-Peled
Journal:  Plant Physiol       Date:  2004-11-24       Impact factor: 8.340

7.  Structural studies by stepwise enzymatic degradation of the main backbone of soybean soluble polysaccharides consisting of galacturonan and rhamnogalacturonan.

Authors:  Akihiro Nakamura; Hitoshi Furuta; Hirokazu Maeda; Toshifumi Takao; Yasunori Nagamatsu
Journal:  Biosci Biotechnol Biochem       Date:  2002-06       Impact factor: 2.043

8.  A function of the Golgi apparatus in polysaccharide synthesis and transport in the root-cap cells of wheat.

Authors:  D H Northcote; J D Pickett-Heaps
Journal:  Biochem J       Date:  1966-01       Impact factor: 3.857

9.  QUASIMODO1 encodes a putative membrane-bound glycosyltransferase required for normal pectin synthesis and cell adhesion in Arabidopsis.

Authors:  Sophie Bouton; Edouard Leboeuf; Gregory Mouille; Marie-Thérèse Leydecker; Joël Talbotec; Fabienne Granier; Marc Lahaye; Herman Höfte; Hoai-Nam Truong
Journal:  Plant Cell       Date:  2002-10       Impact factor: 11.277

10.  Localization of organelle proteins by isotope tagging (LOPIT).

Authors:  T P J Dunkley; R Watson; J L Griffin; P Dupree; K S Lilley
Journal:  Mol Cell Proteomics       Date:  2004-08-04       Impact factor: 5.911

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  98 in total

Review 1.  Growth control by cell wall pectins.

Authors:  Sebastian Wolf; Steffen Greiner
Journal:  Protoplasma       Date:  2012-01-04       Impact factor: 3.356

Review 2.  Biosynthesis of pectin.

Authors:  Jesper Harholt; Anongpat Suttangkakul; Henrik Vibe Scheller
Journal:  Plant Physiol       Date:  2010-04-28       Impact factor: 8.340

3.  Evolution and function of the plant cell wall synthesis-related glycosyltransferase family 8.

Authors:  Yanbin Yin; Huiling Chen; Michael G Hahn; Debra Mohnen; Ying Xu
Journal:  Plant Physiol       Date:  2010-06-03       Impact factor: 8.340

4.  ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta.

Authors:  Jesper Harholt; Jacob Krüger Jensen; Yves Verhertbruggen; Casper Søgaard; Sophie Bernard; Majse Nafisi; Christian Peter Poulsen; Naomi Geshi; Yumiko Sakuragi; Azeddine Driouich; J Paul Knox; Henrik Vibe Scheller
Journal:  Planta       Date:  2012-01-21       Impact factor: 4.116

5.  Breaking an impasse in pectin biosynthesis.

Authors:  Antony Bacic
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-04       Impact factor: 11.205

6.  Genevestigator. Facilitating web-based gene-expression analysis.

Authors:  Aleel K Grennan
Journal:  Plant Physiol       Date:  2006-08       Impact factor: 8.340

7.  The import of S-adenosylmethionine into the Golgi apparatus is required for the methylation of homogalacturonan.

Authors:  Consuelo Ibar; Ariel Orellana
Journal:  Plant Physiol       Date:  2007-08-31       Impact factor: 8.340

8.  GALACTURONOSYLTRANSFERASE-LIKE5 is involved in the production of Arabidopsis seed coat mucilage.

Authors:  Yingzhen Kong; Gongke Zhou; Ashraf A Abdeen; James Schafhauser; Beth Richardson; Melani A Atmodjo; Jiyoung Jung; Louise Wicker; Debra Mohnen; Tamara Western; Michael G Hahn
Journal:  Plant Physiol       Date:  2013-10-03       Impact factor: 8.340

9.  Asparagus IRX9, IRX10, and IRX14A Are Components of an Active Xylan Backbone Synthase Complex that Forms in the Golgi Apparatus.

Authors:  Wei Zeng; Edwin R Lampugnani; Kelsey L Picard; Lili Song; Ai-Min Wu; Isabela M Farion; Jia Zhao; Kris Ford; Monika S Doblin; Antony Bacic
Journal:  Plant Physiol       Date:  2016-03-07       Impact factor: 8.340

10.  Pectin biosynthesis: GALS1 in Arabidopsis thaliana is a β-1,4-galactan β-1,4-galactosyltransferase.

Authors:  April Jennifer Madrid Liwanag; Berit Ebert; Yves Verhertbruggen; Emilie A Rennie; Carsten Rautengarten; Ai Oikawa; Mathias C F Andersen; Mads H Clausen; Henrik Vibe Scheller
Journal:  Plant Cell       Date:  2012-12-14       Impact factor: 11.277

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