Literature DB >> 16005842

Development of a filter assay for measuring homogalacturonan: alpha-(1,4)-Galacturonosyltransferase activity.

Jason D Sterling1, Jason A Lemons, Ivy F Forkner, Debra Mohnen.   

Abstract

Alpha-(1,4)-galacturonosyltransferases (GalATs) catalyze the addition of (1,4)-linked alpha-D-galacturonosyl residues onto the nonreducing end of homogalacturonan chains. The nucleotide-sugar donor for the enzymatic reaction is uridine diphospho-D-galactopyranosyluronic acid (UDP-D-GalpA). Many GalAT activity assays are based on the incorporation of D-[(14)C]GalpA from UDP-D-[(14)C]GalpA onto exogenously added homogalacturonan acceptors. Reactions based on this method can be time-consuming because multiple labor-intensive centrifugations and washes with organic solvents are required to remove the unincorporated UDP-D-[(14)C]GalpA from the (14)C-labeled products. Here we report the development of an alternative GalAT filter assay based on the ability of homogalacturonan to bind to cetylpyridinium chloride (CPC). GalAT assay reaction products made using radish (Raphanus sativus) microsomal membranes or solubilized proteins from tobacco (Nicotiana tabacum L. cv. Samsun) and Arabidopsis thaliana (cv. Columbia) were spotted onto Whatman 3MM paper treated with 2.5% (w/v) CPC. Unincorporated UDP-D-[(14)C]GalpA was selectively removed from the filters by washing with 150-250 mM NaCl. The versatility of this assay is demonstrated by using it to identify GalAT activity in fractions obtained during the partial purification of tobacco GalAT by SP Sepharose cation exchange chromatography and by detecting the GalAT-catalyzed incorporation of D-[(14)C]GalpA onto endogenous acceptors from Arabidopsis membranes.

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Year:  2005        PMID: 16005842     DOI: 10.1016/j.ab.2005.05.037

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  7 in total

1.  Corrigendum to: Identification of key enzymes for pectin synthesis in seed mucilage.

Authors:  Cătălin Voiniciuc; Kristen A Engle; Markus Günl; Sabine Dieluweit; Maximilian Heinrich-Wilhelm Schmidt; Jeong-Yeh Yang; Kelley W Moremen; Debra Mohnen; Björn Usadel
Journal:  Plant Physiol       Date:  2021-04-02       Impact factor: 8.340

2.  Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis.

Authors:  Ajaya K Biswal; Melani A Atmodjo; Mi Li; Holly L Baxter; Chang Geun Yoo; Yunqiao Pu; Yi-Ching Lee; Mitra Mazarei; Ian M Black; Ji-Yi Zhang; Hema Ramanna; Adam L Bray; Zachary R King; Peter R LaFayette; Sivakumar Pattathil; Bryon S Donohoe; Sushree S Mohanty; David Ryno; Kelsey Yee; Olivia A Thompson; Miguel Rodriguez; Alexandru Dumitrache; Jace Natzke; Kim Winkeler; Cassandra Collins; Xiaohan Yang; Li Tan; Robert W Sykes; Erica L Gjersing; Angela Ziebell; Geoffrey B Turner; Stephen R Decker; Michael G Hahn; Brian H Davison; Michael K Udvardi; Jonathan R Mielenz; Mark F Davis; Richard S Nelson; Wayne A Parrott; Arthur J Ragauskas; C Neal Stewart; Debra Mohnen
Journal:  Nat Biotechnol       Date:  2018-02-12       Impact factor: 54.908

3.  A two-phase model for the non-processive biosynthesis of homogalacturonan polysaccharides by the GAUT1:GAUT7 complex.

Authors:  Robert A Amos; Sivakumar Pattathil; Jeong-Yeh Yang; Melani A Atmodjo; Breeanna R Urbanowicz; Kelley W Moremen; Debra Mohnen
Journal:  J Biol Chem       Date:  2018-10-16       Impact factor: 5.157

4.  Multiple Arabidopsis galacturonosyltransferases synthesize polymeric homogalacturonan by oligosaccharide acceptor-dependent or de novo synthesis.

Authors:  Kristen A Engle; Robert A Amos; Jeong-Yeh Yang; John Glushka; Melani A Atmodjo; Li Tan; Chin Huang; Kelley W Moremen; Debra Mohnen
Journal:  Plant J       Date:  2021-12-27       Impact factor: 6.417

5.  Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase.

Authors:  Jason D Sterling; Melani A Atmodjo; Sarah E Inwood; V S Kumar Kolli; Heather F Quigley; Michael G Hahn; Debra Mohnen
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-15       Impact factor: 11.205

6.  Identification of Key Enzymes for Pectin Synthesis in Seed Mucilage.

Authors:  Cătălin Voiniciuc; Kristen A Engle; Markus Günl; Sabine Dieluweit; Maximilian Heinrich-Wilhelm Schmidt; Jeong-Yeh Yang; Kelley W Moremen; Debra Mohnen; Björn Usadel
Journal:  Plant Physiol       Date:  2018-09-18       Impact factor: 8.340

7.  Loss of Arabidopsis GAUT12/IRX8 causes anther indehiscence and leads to reduced G lignin associated with altered matrix polysaccharide deposition.

Authors:  Zhangying Hao; Utku Avci; Li Tan; Xiang Zhu; John Glushka; Sivakumar Pattathil; Stefan Eberhard; Tipton Sholes; Grace E Rothstein; Wolfgang Lukowitz; Ron Orlando; Michael G Hahn; Debra Mohnen
Journal:  Front Plant Sci       Date:  2014-07-28       Impact factor: 5.753

  7 in total

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