Literature DB >> 16530786

Cytoplasmic shuttling of protons in anabaena sensory rhodopsin: implications for signaling mechanism.

Lichi Shi1, Sa Ryong Yoon, Arandi G Bezerra, Kwang-Hwan Jung, Leonid S Brown.   

Abstract

It was found recently that Anabaena sensory rhodopsin (ASR), which possibly serves as a photoreceptor for chromatic adaptation, interacts with a soluble cytoplasmic transducer. The X-ray structure of the transducer-free protein revealed an extensive hydrogen-bonded network of amino acid residues and water molecules in the cytoplasmic half of ASR, in high contrast to its haloarchaeal counterparts. Using time-resolved spectroscopy of the wild-type and mutant ASR in the visible and infrared ranges, we tried to determine whether this hydrogen-bonded network is used to translocate protons and whether those proton transfers are important for interaction with the transducer. We found that the retinal Schiff base deprotonation, which occurs in the M intermediate of the photocycle of all-trans-ASR, results in protonation of Asp217 on the cytoplasmic side of the protein. The deprotonation of the Schiff base induces a conformational change of ASR observed through the perturbation of associated lipids. We suggest that the cytoplasmic shuttling of protons in the photocycle of all-trans-ASR and the ensuing conformational changes might activate the transducer. Consequently, the M intermediate may be the signaling state of ASR.

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Year:  2006        PMID: 16530786     DOI: 10.1016/j.jmb.2006.02.036

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  16 in total

1.  Photoreactions and structural changes of anabaena sensory rhodopsin.

Authors:  Akira Kawanabe; Hideki Kandori
Journal:  Sensors (Basel)       Date:  2009-12-03       Impact factor: 3.576

2.  Role of the cytoplasmic domain in Anabaena sensory rhodopsin photocycling: vectoriality of Schiff base deprotonation.

Authors:  Oleg A Sineshchekov; Elena N Spudich; Vishwa D Trivedi; John L Spudich
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  High-resolution paramagnetically enhanced solid-state NMR spectroscopy of membrane proteins at fast magic angle spinning.

Authors:  Meaghan E Ward; Shenlin Wang; Sridevi Krishnamurthy; Howard Hutchins; Michael Fey; Leonid S Brown; Vladimir Ladizhansky
Journal:  J Biomol NMR       Date:  2013-12-13       Impact factor: 2.835

5.  Photo-induced regulation of the chromatic adaptive gene expression by Anabaena sensory rhodopsin.

Authors:  Hiroki Irieda; Teppei Morita; Kimika Maki; Michio Homma; Hiroji Aiba; Yuki Sudo
Journal:  J Biol Chem       Date:  2012-08-07       Impact factor: 5.157

6.  Site-specific solid-state NMR detection of hydrogen-deuterium exchange reveals conformational changes in a 7-helical transmembrane protein.

Authors:  Shenlin Wang; Lichi Shi; Izuru Kawamura; Leonid S Brown; Vladimir Ladizhansky
Journal:  Biophys J       Date:  2011-08-03       Impact factor: 4.033

7.  Diversity, Mechanism, and Optogenetic Application of Light-Driven Ion Pump Rhodopsins.

Authors:  Keiichi Inoue
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

8.  Structure of an Inward Proton-Transporting Anabaena Sensory Rhodopsin Mutant: Mechanistic Insights.

Authors:  Bamboo Dong; Lissete Sánchez-Magraner; Hartmut Luecke
Journal:  Biophys J       Date:  2016-09-06       Impact factor: 4.033

Review 9.  An inward proton transport using Anabaena sensory rhodopsin.

Authors:  Akira Kawanabe; Yuji Furutani; Kwang-Hwan Jung; Hideki Kandori
Journal:  J Microbiol       Date:  2011-03-03       Impact factor: 3.422

10.  The photocycle and proton translocation pathway in a cyanobacterial ion-pumping rhodopsin.

Authors:  Mylene R M Miranda; Ah Rheum Choi; Lichi Shi; Arandi G Bezerra; Kwang-Hwan Jung; Leonid S Brown
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

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