Literature DB >> 16517667

Kinetics of single cells: observation and modeling of a stochastic process.

Carmen Pin1, József Baranyi.   

Abstract

The successive generation times for single cells of Escherichia coli K-12 were measured as described by A. Elfwing, Y. LeMarc, J. Baranyi, and A. Ballagi (Appl. Environ. Microbiol. 70:675-678, 2004), and the histograms they generated were used as empirical distributions to simulate growth of the population as the result of the multiplication of its single cells. This way, a stochastic birth model in which the underlying distributions were measured experimentally was simulated. To validate the model, analogous bacterial growth curves were generated by the use of different inoculum levels. The agreement with the simulation was very good, proving that the growth of the population can be predicted accurately if the distribution of the first few division times for the single cells within that population is known. Two questions were investigated by the simulation. (i) To what extent can we say that the distribution of the detection time, i.e., the time by which a single-cell-generated subpopulation reaches a detectable level, can be identified with that of the lag time of the original single cell? (ii) For low inocula, how does the inoculum size affect the lag time of the population?

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Year:  2006        PMID: 16517667      PMCID: PMC1393193          DOI: 10.1128/AEM.72.3.2163-2169.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  21 in total

1.  Significance of inoculum size in the lag time of Listeria monocytogenes.

Authors:  J C Augustin; A Brouillaud-Delattre; L Rosso; V Carlier
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  The effect of inoculum size on the lag phase of Listeria monocytogenes.

Authors:  T P Robinson; O O Aboaba; A Kaloti; M J Ocio; J Baranyi; B M Mackey
Journal:  Int J Food Microbiol       Date:  2001-10-22       Impact factor: 5.277

3.  A parallel study on bacterial growth and inactivation.

Authors:  J Baranyi; C Pin
Journal:  J Theor Biol       Date:  2001-06-07       Impact factor: 2.691

4.  Observing growth and division of large numbers of individual bacteria by image analysis.

Authors:  A Elfwing; Y LeMarc; J Baranyi; A Ballagi
Journal:  Appl Environ Microbiol       Date:  2004-02       Impact factor: 4.792

5.  Connection between stochastic and deterministic modelling of microbial growth.

Authors:  Zoltán Kutalik; Moe Razaz; József Baranyi
Journal:  J Theor Biol       Date:  2005-01-21       Impact factor: 2.691

6.  Obtaining single cells: analysis and evaluation of an experimental protocol by means of a simulation model.

Authors:  A R Standaert; A H Geeraerd; K Bernaerts; K Francois; F Devlieghere; J Debevere; J F Van Impe
Journal:  Int J Food Microbiol       Date:  2004-12-16       Impact factor: 5.277

7.  Stochastic modelling of individual cell growth using flow chamber microscopy images.

Authors:  Zoltán Kutalik; Moe Razaz; Anders Elfwing; András Ballagi; József Baranyi
Journal:  Int J Food Microbiol       Date:  2005-08-08       Impact factor: 5.277

8.  The effect of incubation temperature and inoculum size on growth of salmonellae in minced beef.

Authors:  B M Mackey; A L Kerridge
Journal:  Int J Food Microbiol       Date:  1988-02       Impact factor: 5.277

Review 9.  A dynamic approach to predicting bacterial growth in food.

Authors:  J Baranyi; T A Roberts
Journal:  Int J Food Microbiol       Date:  1994-11       Impact factor: 5.277

10.  Aging and death in an organism that reproduces by morphologically symmetric division.

Authors:  Eric J Stewart; Richard Madden; Gregory Paul; François Taddei
Journal:  PLoS Biol       Date:  2005-02-01       Impact factor: 8.029

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  25 in total

1.  Autonomous growth of isolated single Listeria monocytogenes and Salmonella enterica serovar typhimurium cells in the absence of growth factors and intercellular contact.

Authors:  Barbara Roeder; Martin Wagner; Peter Rossmanith
Journal:  Appl Environ Microbiol       Date:  2010-02-19       Impact factor: 4.792

2.  Indirect measurement of the lag time distribution of single cells of Listeria innocua in food.

Authors:  M D'Arrigo; G D García de Fernando; R Velasco de Diego; J A Ordóñez; S M George; C Pin
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

3.  Use of optical density detection times to assess the effect of acetic acid on single-cell kinetics.

Authors:  A Métris; S M George; J Baranyi
Journal:  Appl Environ Microbiol       Date:  2006-09-01       Impact factor: 4.792

4.  Single-cell and population lag times as a function of cell age.

Authors:  Carmen Pin; József Baranyi
Journal:  Appl Environ Microbiol       Date:  2008-02-22       Impact factor: 4.792

5.  Age-dependent stochastic models for understanding population fluctuations in continuously cultured cells.

Authors:  Evgeny B Stukalin; Ivie Aifuwa; Jin Seob Kim; Denis Wirtz; Sean X Sun
Journal:  J R Soc Interface       Date:  2013-06-12       Impact factor: 4.118

6.  Historical and contemporary NaCl concentrations affect the duration and distribution of lag times from individual spores of nonproteolytic clostridium botulinum.

Authors:  Martin D Webb; Carmen Pin; Michael W Peck; Sandra C Stringer
Journal:  Appl Environ Microbiol       Date:  2007-02-02       Impact factor: 4.792

7.  Estimating risk from small inocula by using population growth parameters.

Authors:  P K Malakar; G C Barker
Journal:  Appl Environ Microbiol       Date:  2009-07-31       Impact factor: 4.792

8.  Modeling the variability of single-cell lag times for Listeria innocua populations after sublethal and lethal heat treatments.

Authors:  A Métris; S M George; B M Mackey; J Baranyi
Journal:  Appl Environ Microbiol       Date:  2008-09-26       Impact factor: 4.792

9.  Probabilistic model of microbial cell growth, division, and mortality.

Authors:  Joseph Horowitz; Mark D Normand; Maria G Corradini; Micha Peleg
Journal:  Appl Environ Microbiol       Date:  2009-11-13       Impact factor: 4.792

10.  Growing from a few cells: combined effects of initial stochasticity and cell-to-cell variability.

Authors:  A Barizien; M S Suryateja Jammalamadaka; G Amselem; Charles N Baroud
Journal:  J R Soc Interface       Date:  2019-04-26       Impact factor: 4.118

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