Literature DB >> 23760298

Age-dependent stochastic models for understanding population fluctuations in continuously cultured cells.

Evgeny B Stukalin1, Ivie Aifuwa, Jin Seob Kim, Denis Wirtz, Sean X Sun.   

Abstract

For symmetrically dividing cells, large variations in the cell cycle time are typical, even among clonal cells. The consequence of this variation is important in stem cell differentiation, tissue and organ size control, and cancer development, where cell division rates ultimately determine the cell population. We explore the connection between cell cycle time variation and population-level fluctuations using simple stochastic models. We find that standard population models with constant division and death rates fail to predict the level of population fluctuation. Instead, variations in the cell division time contribute to population fluctuations. An age-dependent birth and death model allows us to compute the mean squared fluctuation or the population dispersion as a function of time. This dispersion grows exponentially with time, but scales with the population. We also find a relationship between the dispersion and the cell cycle time distribution for synchronized cell populations. The model can easily be generalized to study populations involving cell differentiation and competitive growth situations.

Entities:  

Keywords:  cell cycle variation; evolutionary models; stochastic population dynamics

Mesh:

Year:  2013        PMID: 23760298      PMCID: PMC3971721          DOI: 10.1098/rsif.2013.0325

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  25 in total

1.  A parallel study on bacterial growth and inactivation.

Authors:  J Baranyi; C Pin
Journal:  J Theor Biol       Date:  2001-06-07       Impact factor: 2.691

2.  Do cells cycle?

Authors:  J A Smith; L Martin
Journal:  Proc Natl Acad Sci U S A       Date:  1973-04       Impact factor: 11.205

3.  Synchronous growth of enteric bacteria.

Authors:  T E Shehata; A G Marr
Journal:  J Bacteriol       Date:  1970-09       Impact factor: 3.490

4.  A maturity-time representation for cell populations.

Authors:  S I Rubinow
Journal:  Biophys J       Date:  1968-10       Impact factor: 4.033

5.  The cell cycle in Escherichia coli B/r.

Authors:  H Bremer; L Chuang
Journal:  J Theor Biol       Date:  1981-01-07       Impact factor: 2.691

6.  Mathematical models for cellular systems. The Von Foerster equation. II.

Authors:  E Trucco
Journal:  Bull Math Biophys       Date:  1965-12

7.  Mathematical models for cellular systems the Von Foerster equation. I.

Authors:  E Trucco
Journal:  Bull Math Biophys       Date:  1965-09

8.  Stochastic modeling of stem-cell dynamics with control.

Authors:  Zheng Sun; Natalia L Komarova
Journal:  Math Biosci       Date:  2012-08-31       Impact factor: 2.144

9.  Variation of generation times in Escherichia coli populations: its cause and implications.

Authors:  H Bremer
Journal:  J Gen Microbiol       Date:  1982-12

10.  Clonal growth of mouse cells (strain L).

Authors:  H Miyamoto; E Zeuthen; L Rasmussen
Journal:  J Cell Sci       Date:  1973-11       Impact factor: 5.285

View more
  20 in total

1.  Theoretical investigation of stochastic clearance of bacteria: first-passage analysis.

Authors:  Hamid Teimouri; Anatoly B Kolomeisky
Journal:  J R Soc Interface       Date:  2019-03-29       Impact factor: 4.118

2.  Growing from a few cells: combined effects of initial stochasticity and cell-to-cell variability.

Authors:  A Barizien; M S Suryateja Jammalamadaka; G Amselem; Charles N Baroud
Journal:  J R Soc Interface       Date:  2019-04-26       Impact factor: 4.118

3.  Bifurcation thresholds and optimal control in transmission dynamics of arboviral diseases.

Authors:  Hamadjam Abboubakar; Jean Claude Kamgang; Leontine Nkague Nkamba; Daniel Tieudjo
Journal:  J Math Biol       Date:  2017-06-06       Impact factor: 2.259

4.  Quantifying gene expression variability arising from randomness in cell division times.

Authors:  Duarte Antunes; Abhyudai Singh
Journal:  J Math Biol       Date:  2014-09-03       Impact factor: 2.259

5.  Age distribution dynamics with stochastic jumps in mortality.

Authors:  Salvatore Calabrese; Amilcare Porporato; Francesco Laio; Paolo D'Odorico; Luca Ridolfi
Journal:  Proc Math Phys Eng Sci       Date:  2017-11-01       Impact factor: 2.704

6.  Ergodicity, hidden bias and the growth rate gain.

Authors:  Nash D Rochman; Dan M Popescu; Sean X Sun
Journal:  Phys Biol       Date:  2018-03-14       Impact factor: 2.583

7.  To grow is not enough: impact of noise on cell environmental response and fitness.

Authors:  Nash Rochman; Fangwei Si; Sean X Sun
Journal:  Integr Biol (Camb)       Date:  2016-10-10       Impact factor: 2.192

8.  Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes.

Authors:  Mohammad Soltani; Cesar A Vargas-Garcia; Duarte Antunes; Abhyudai Singh
Journal:  PLoS Comput Biol       Date:  2016-08-18       Impact factor: 4.475

9.  Quantifying Lgr5-positive stem cell behaviour in the pyloric epithelium.

Authors:  Marc Leushacke; Nick Barker; Carmen Pin
Journal:  Sci Rep       Date:  2016-02-26       Impact factor: 4.379

10.  A Hierarchical Kinetic Theory of Birth, Death and Fission in Age-Structured Interacting Populations.

Authors:  Tom Chou; Chris D Greenman
Journal:  J Stat Phys       Date:  2016-05-14       Impact factor: 1.548

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.