Literature DB >> 16498405

Large-scale identification of genes implicated in kidney glomerulus development and function.

Minoru Takemoto1, Liqun He, Jenny Norlin, Jaakko Patrakka, Zhijie Xiao, Tatiana Petrova, Cecilia Bondjers, Julia Asp, Elisabet Wallgard, Ying Sun, Tore Samuelsson, Petter Mostad, Samuel Lundin, Naoyuki Miura, Yoshikazu Sado, Kari Alitalo, Susan E Quaggin, Karl Tryggvason, Christer Betsholtz.   

Abstract

To advance our understanding of development, function and diseases in the kidney glomerulus, we have established and large-scale sequenced cDNA libraries from mouse glomeruli at different stages of development, resulting in a catalogue of 6053 different genes. The glomerular cDNA clones were arrayed and hybridized against a series of labeled targets from isolated glomeruli, non-glomerular kidney tissue, FACS-sorted podocytes and brain capillaries, which identified over 300 glomerular cell-enriched transcripts, some of which were further sublocalized to podocytes, mesangial cells and juxtaglomerular cells by in situ hybridization. For the earliest podocyte marker identified, Foxc2, knockout mice were used to analyze the role of this protein during glomerular development. We show that Foxc2 controls the expression of a distinct set of podocyte genes involved in podocyte differentiation and glomerular basement membrane maturation. The primary podocyte defects also cause abnormal differentiation and organization of the glomerular vascular cells. We surmise that studies on the other novel glomerulus-enriched transcripts identified in this study will provide new insight into glomerular development and pathomechanisms of disease.

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Year:  2006        PMID: 16498405      PMCID: PMC1409724          DOI: 10.1038/sj.emboj.7601014

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  67 in total

1.  Glomerular-specific gene excision in vivo.

Authors:  Vera Eremina; Mark Andrew Wong; Shiying Cui; Lois Schwartz; Susan E Quaggin
Journal:  J Am Soc Nephrol       Date:  2002-03       Impact factor: 10.121

2.  NPHS2, encoding the glomerular protein podocin, is mutated in autosomal recessive steroid-resistant nephrotic syndrome.

Authors:  N Boute; O Gribouval; S Roselli; F Benessy; H Lee; A Fuchshuber; K Dahan; M C Gubler; P Niaudet; C Antignac
Journal:  Nat Genet       Date:  2000-04       Impact factor: 38.330

3.  Mutations in LMX1B cause abnormal skeletal patterning and renal dysplasia in nail patella syndrome.

Authors:  S D Dreyer; G Zhou; A Baldini; A Winterpacht; B Zabel; W Cole; R L Johnson; B Lee
Journal:  Nat Genet       Date:  1998-05       Impact factor: 38.330

4.  Insertional mutation of the collagen genes Col4a3 and Col4a4 in a mouse model of Alport syndrome.

Authors:  W Lu; C L Phillips; P D Killen; T Hlaing; W R Harrison; F F Elder; J H Miner; P A Overbeek; M H Meisler
Journal:  Genomics       Date:  1999-10-15       Impact factor: 5.736

5.  MFH-1, a new member of the fork head domain family, is expressed in developing mesenchyme.

Authors:  N Miura; A Wanaka; M Tohyama; K Tanaka
Journal:  FEBS Lett       Date:  1993-07-12       Impact factor: 4.124

6.  A novel frameshift mutation of FOXC2 gene in a family with hereditary lymphedema-distichiasis syndrome associated with renal disease and diabetes mellitus.

Authors:  Cagri Yildirim-Toruner; Kavitha Subramanian; Lamya El Manjra; Emily Chen; Stanley Goldstein; Emilia Vitale
Journal:  Am J Med Genet A       Date:  2004-12-15       Impact factor: 2.802

7.  Endothelium-specific platelet-derived growth factor-B ablation mimics diabetic retinopathy.

Authors:  Maria Enge; Mattias Bjarnegård; Holger Gerhardt; Erika Gustafsson; Mattias Kalén; Noomi Asker; Hans-Peter Hammes; Moshe Shani; Reinhardt Fässler; Christer Betsholtz
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

8.  Microarray analysis of gene expression in the kidneys of new- and post-onset diabetic NOD mice.

Authors:  Karen H S Wilson; Sarah E Eckenrode; Quan-Zhen Li; Qing-Guo Ruan; Ping Yang; Jing-Da Shi; Abdoreza Davoodi-Semiromi; Richard A McIndoe; Byron P Croker; Jin-Xiong She
Journal:  Diabetes       Date:  2003-08       Impact factor: 9.461

9.  PDGF-A signaling is a critical event in lung alveolar myofibroblast development and alveogenesis.

Authors:  H Boström; K Willetts; M Pekny; P Levéen; P Lindahl; H Hedstrand; M Pekna; M Hellström; S Gebre-Medhin; M Schalling; M Nilsson; S Kurland; J Törnell; J K Heath; C Betsholtz
Journal:  Cell       Date:  1996-06-14       Impact factor: 41.582

10.  Human laminin beta2 deficiency causes congenital nephrosis with mesangial sclerosis and distinct eye abnormalities.

Authors:  Martin Zenker; Thomas Aigner; Olaf Wendler; Tim Tralau; Horst Müntefering; Regina Fenski; Susanne Pitz; Valérie Schumacher; Brigitte Royer-Pokora; Elke Wühl; Pierre Cochat; Raymonde Bouvier; Cornelia Kraus; Karlheinz Mark; Henry Madlon; Jörg Dötsch; Wolfgang Rascher; Iwona Maruniak-Chudek; Thomas Lennert; Luitgard M Neumann; André Reis
Journal:  Hum Mol Genet       Date:  2004-09-14       Impact factor: 6.150

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  85 in total

1.  Notch signaling, wt1 and foxc2 are key regulators of the podocyte gene regulatory network in Xenopus.

Authors:  Jeffrey T White; Bo Zhang; Débora M Cerqueira; Uyen Tran; Oliver Wessely
Journal:  Development       Date:  2010-04-28       Impact factor: 6.868

2.  Glomerular podocytes express type 1 adenylate cyclase: inactivation results in susceptibility to proteinuria.

Authors:  Zhijie Xiao; Liqun He; Minoru Takemoto; Hannu Jalanko; Guy C Chan; Daniel R Storm; Christer Betsholtz; Karl Tryggvason; Jaakko Patrakka
Journal:  Nephron Exp Nephrol       Date:  2010-12-24

3.  AP-2β/KCTD1 Control Distal Nephron Differentiation and Protect against Renal Fibrosis.

Authors:  Alexander G Marneros
Journal:  Dev Cell       Date:  2020-06-17       Impact factor: 12.270

4.  Mesangial cell integrin αvβ8 provides glomerular endothelial cell cytoprotection by sequestering TGF-β and regulating PECAM-1.

Authors:  Shenaz Khan; Sujata Lakhe-Reddy; Joseph H McCarty; Christine M Sorenson; Nader Sheibani; Louis F Reichardt; Jane H Kim; Bingcheng Wang; John R Sedor; Jeffrey R Schelling
Journal:  Am J Pathol       Date:  2011-02       Impact factor: 4.307

5.  The glomerular transcriptome and a predicted protein-protein interaction network.

Authors:  Liqun He; Ying Sun; Minoru Takemoto; Jenny Norlin; Karl Tryggvason; Tore Samuelsson; Christer Betsholtz
Journal:  J Am Soc Nephrol       Date:  2007-11-21       Impact factor: 10.121

6.  Use of dual section mRNA in situ hybridisation/immunohistochemistry to clarify gene expression patterns during the early stages of nephron development in the embryo and in the mature nephron of the adult mouse kidney.

Authors:  Kylie Georgas; Bree Rumballe; Lorine Wilkinson; Han Sheng Chiu; Emmanuelle Lesieur; Thierry Gilbert; Melissa H Little
Journal:  Histochem Cell Biol       Date:  2008-07-11       Impact factor: 4.304

7.  Organoid single cell profiling identifies a transcriptional signature of glomerular disease.

Authors:  Jennifer L Harder; Rajasree Menon; Edgar A Otto; Jian Zhou; Sean Eddy; Noel L Wys; Christopher O'Connor; Jinghui Luo; Viji Nair; Cristina Cebrian; Jason R Spence; Markus Bitzer; Olga G Troyanskaya; Jeffrey B Hodgin; Roger C Wiggins; Benjamin S Freedman; Matthias Kretzler
Journal:  JCI Insight       Date:  2019-01-10

Review 8.  Understanding kidney disease: toward the integration of regulatory networks across species.

Authors:  Wenjun Ju; Frank C Brosius
Journal:  Semin Nephrol       Date:  2010-09       Impact factor: 5.299

9.  Mutations in EMP2 cause childhood-onset nephrotic syndrome.

Authors:  Heon Yung Gee; Shazia Ashraf; Xiaoyang Wan; Virginia Vega-Warner; Julian Esteve-Rudd; Svjetlana Lovric; Humphrey Fang; Toby W Hurd; Carolin E Sadowski; Susan J Allen; Edgar A Otto; Emine Korkmaz; Joseph Washburn; Shawn Levy; David S Williams; Sevcan A Bakkaloglu; Anna Zolotnitskaya; Fatih Ozaltin; Weibin Zhou; Friedhelm Hildebrandt
Journal:  Am J Hum Genet       Date:  2014-05-08       Impact factor: 11.025

10.  Semaphorin3a regulates endothelial cell number and podocyte differentiation during glomerular development.

Authors:  Kimberly J Reidy; Guillermo Villegas; Jason Teichman; Delma Veron; Wa Shen; Juan Jimenez; David Thomas; Alda Tufro
Journal:  Development       Date:  2009-12       Impact factor: 6.868

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