Literature DB >> 16475795

Energetics of a possible proton exit pathway for water oxidation in photosystem II.

Hiroshi Ishikita1, Wolfram Saenger, Bernhard Loll, Jacek Biesiadka, Ernst-Walter Knapp.   

Abstract

The crystal structure of photosystem II (PSII) at 3.0-A resolution suggests that titratable residues on the lumenal side of D1/D2 and PsbO form a polar channel, which might serve as a proton exit pathway associated with water oxidation on the Mn-cluster. With full account of protein environment, we calculated the pK(a) of these residues by solving the linearized Poisson-Boltzmann equation. Along the prospective proton channel, the calculated pK(a) of titratable residues (namely via D1-Asp61, D1-Glu65, D2-Glu312, D2-Lys317 D1-Asp59, D1-Arg64, PsbO-Arg152, and PsbO-Asp224) monotonically increase from the Mn-cluster to the lumenal bulk side. We suggest that these residues form the exit pathway guiding protons, which are released at the Mn-cluster as a product of water oxidation, in an exergonic process out of PSII. Upon the S2 to S3 transition, CP43-Arg357 showed a dramatic deprotonation of ca. one H(+), suggesting that this residue is coupled to the redox states of the Mn-cluster and the tyrosine Y(Z). The calculated pK(a) values of 4.2-4.4 for D2-Glu312 and those of approximately 8-10.9 for D1-Asp59 and D1-Arg64 are indicative of the experimentally determined pK(a) values for inhibition of S-state transitions. Upon removal of the atomic coordinates of PsbO, the pK(a) of these residues are dramatically affected, indicating a significant role of PsbO in tuning the pK(a) of those residues in the proton exit pathway.

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Year:  2006        PMID: 16475795     DOI: 10.1021/bi051615h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  39 in total

Review 1.  Proton-coupled electron transfer.

Authors:  My Hang V Huynh; Thomas J Meyer
Journal:  Chem Rev       Date:  2007-11       Impact factor: 60.622

2.  Computational studies of the O(2)-evolving complex of photosystem II and biomimetic oxomanganese complexes.

Authors:  Eduardo M Sproviero; José A Gascón; James P McEvoy; Gary W Brudvig; Victor S Batista
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

Review 3.  Photosystem II: The machinery of photosynthetic water splitting.

Authors:  Gernot Renger; Thomas Renger
Journal:  Photosynth Res       Date:  2008-10-01       Impact factor: 3.573

Review 4.  Uncovering channels in photosystem II by computer modelling: current progress, future prospects, and lessons from analogous systems.

Authors:  Felix M Ho
Journal:  Photosynth Res       Date:  2008-09-17       Impact factor: 3.573

Review 5.  Substrate water binding and oxidation in photosystem II.

Authors:  Iain L McConnell
Journal:  Photosynth Res       Date:  2008-09-03       Impact factor: 3.573

6.  Protein Ligation of the Photosynthetic Oxygen-Evolving Center.

Authors:  Richard J Debus
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

Review 7.  Computational insights into the O2-evolving complex of photosystem II.

Authors:  Eduardo M Sproviero; James P McEvoy; José A Gascón; Gary W Brudvig; Victor S Batista
Journal:  Photosynth Res       Date:  2008-05-16       Impact factor: 3.573

8.  Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn.

Authors:  Matthias Broser; Carina Glöckner; Azat Gabdulkhakov; Albert Guskov; Joachim Buchta; Jan Kern; Frank Müh; Holger Dau; Wolfram Saenger; Athina Zouni
Journal:  J Biol Chem       Date:  2011-03-02       Impact factor: 5.157

Review 9.  Water oxidation chemistry of photosystem II.

Authors:  Gary W Brudvig
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-03-27       Impact factor: 6.237

10.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

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