Literature DB >> 16423845

Functional analysis of organophosphorus hydrolase variants with high degradation activity towards organophosphate pesticides.

Catherine Mee-Hie Cho1, Ashok Mulchandani, Wilfred Chen.   

Abstract

Organophosphorus hydrolase (OPH, also known as phosphotriesterase) is a bacterial enzyme that is capable of degrading a wide range of neurotoxic organophosphate nerve agents. Directed evolution has been used to generate one variant (22A11) with up to 25-fold improved hydrolysis of methyl parathion. Surprisingly, this variant also degraded all other substrates (paraoxon, parathion and coumaphos) tested 2- to 10-fold faster. Since only one mutation (H257Y) is directly located in the active site, site-directed mutagenesis and saturation mutagenesis were used to identify the role of the other distal substitutions (A14T, A80V, K185R, H257Y, I274N) on substrate specificity and activity. Sequential site-directed mutagenesis indicated that K185R and I274N are the most important substitutions, leading to an improvement not only in the hydrolysis of methyl parathion but also the overall hydrolysis rate of all other substrates tested. Using structural modeling, these two mutations were shown to favor the formation of hydrogen bonds with nearby residues, resulting in structural changes that could alter the overall substrate hydrolysis.

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Year:  2006        PMID: 16423845     DOI: 10.1093/protein/gzj007

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  17 in total

1.  Improving the specificity of organophosphorus hydrolase to acephate by mutagenesis at its binding site: a computational study.

Authors:  Reza Badakhshan; Mozafar Mohammadi; Gholamreza Farnoosh
Journal:  J Mol Model       Date:  2021-05-10       Impact factor: 1.810

2.  Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents.

Authors:  Ping-Chuan Tsai; Nicholas Fox; Andrew N Bigley; Steven P Harvey; David P Barondeau; Frank M Raushel
Journal:  Biochemistry       Date:  2012-07-31       Impact factor: 3.162

3.  Purification and characterization of methyl parathion hydrolase from Burkholderia cepacia capable of degrading organophosphate insecticides.

Authors:  Anirut Ekkhunnatham; Boonsri Jongsareejit; Wanphen Yamkunthong; Jesdawan Wichitwechkarn
Journal:  World J Microbiol Biotechnol       Date:  2011-12-31       Impact factor: 3.312

4.  Survival of prokaryotes in a polluted waste dump during remediation by alkaline hydrolysis.

Authors:  Marie Bank Nielsen; Kasper Urup Kjeldsen; Mark Alexander Lever; Kjeld Ingvorsen
Journal:  Ecotoxicology       Date:  2014-02-16       Impact factor: 2.823

Review 5.  Organophosphate-Hydrolyzing Enzymes as First-Line of Defence Against Nerve Agent-Poisoning: Perspectives and the Road Ahead.

Authors:  A R Satvik Iyengar; Abhay H Pande
Journal:  Protein J       Date:  2016-12       Impact factor: 2.371

6.  Directed evolution of hydrolases for prevention of G-type nerve agent intoxication.

Authors:  Rinkoo D Gupta; Moshe Goldsmith; Yacov Ashani; Yair Simo; Gavriel Mullokandov; Hagit Bar; Moshe Ben-David; Haim Leader; Raanan Margalit; Israel Silman; Joel L Sussman; Dan S Tawfik
Journal:  Nat Chem Biol       Date:  2011-01-09       Impact factor: 15.040

7.  The role of nonbonded interactions in the conformational dynamics of organophosphorous hydrolase adsorbed onto functionalized mesoporous silica surfaces.

Authors:  Diego E B Gomes; Roberto D Lins; Pedro G Pascutti; Chenghong Lei; Thereza A Soares
Journal:  J Phys Chem B       Date:  2010-01-14       Impact factor: 2.991

8.  Molecular dynamics simulations of the detoxification of paraoxon catalyzed by phosphotriesterase.

Authors:  Xin Zhang; Ruibo Wu; Lingchun Song; Yuchun Lin; Menghai Lin; Zexing Cao; Wei Wu; Yirong Mo
Journal:  J Comput Chem       Date:  2009-11-30       Impact factor: 3.376

Review 9.  Catalytic mechanisms for phosphotriesterases.

Authors:  Andrew N Bigley; Frank M Raushel
Journal:  Biochim Biophys Acta       Date:  2012-04-26

Review 10.  Enhancing organophosphate hydrolase efficacy via protein engineering and immobilization strategies.

Authors:  Priya Katyal; Stanley Chu; Jin Kim Montclare
Journal:  Ann N Y Acad Sci       Date:  2020-08-19       Impact factor: 5.691

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