| Literature DB >> 16423305 |
Kuo-Liong Chien1, Wei J Chen, Hsiu-Ching Hsu, Ta-Chen Su, Ming-Fong Chen, Yuan-Teh Lee.
Abstract
BACKGROUND: Apolipoprotein (Apo) A1 is a protective factor for cardiovascular events. This study aimed to perform complex segregation analyses of Apo A1 levels in families of adolescents systematically ascertained from the junior high school students in a rural community. Both siblings and parents of the adolescent probands were recruited for the study. Apo A1 concentrations were measured by turbidimetric immunoassay methods. After adjustment for gender, age, body mass index, smoking and drinking status, residual values of Apo A1 were subjected to subsequent analyses.Entities:
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Year: 2006 PMID: 16423305 PMCID: PMC1360683 DOI: 10.1186/1471-2156-7-4
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Basic demographic and atherosclerotic risk profiles in this family study, specified by generations (n = 1,145)
| Probands (N = 368) | Siblings (N = 333) | Parents (N = 444) | ||||||||||
| Mean | SD | Skewness | Kurtosis | Mean | SD | Skewness | Kurtosis | Mean | SD | Skewness | Kurtosis | |
| Age (years) *** | 16.45 | 0.97 | 0.33 | 0.34 | 17.83 | 3.43 | 0.59 | 1.05 | 43.65 | 5.74 | 1.35 | 4.65 |
| BW (kg) *** | 54.07 | 12.87 | 1.04 | 1.48 | 52.57 | 11.03 | 0.93 | 2.54 | 62.87 | 11.93 | 1.08 | 6.02 |
| BH (cm) | 161.28 | 8.46 | -0.06 | 0.03 | 161.27 | 8.95 | -0.01 | 1.06 | 160.90 | 7.68 | 0.07 | -0.31 |
| BMI (kg/m2) *** | 20.63 | 3.87 | 1.13 | 1.24 | 20.08 | 3.13 | 1.31 | 4.26 | 24.23 | 3.91 | 1.03 | 4.40 |
| SBP (mmHg) *** | 108.86 | 13.02 | 0.34 | -0.34 | 111.65 | 12.90 | 0.36 | 0.27 | 119.13 | 15.12 | 0.82 | 1.28 |
| DBP (mmHg) *** | 67.79 | 9.33 | -0.05 | -0.75 | 70.66 | 10.36 | 0.18 | 0.51 | 78.48 | 11.46 | 0.70 | 0.68 |
| TC (mg/dL) *** | 168.98 | 36.43 | 1.78 | 11.91 | 164.94 | 33.17 | 0.74 | 0.70 | 195.85 | 35.76 | 0.29 | 0.54 |
| TG (mg/dL) *** | 85.49 | 40.14 | 1.92 | 7.98 | 88.86 | 43.67 | 2.96 | 18.43 | 156.24 | 134.29 | 2.66 | 8.26 |
| HDL-C (mg/dL) * | 43.49 | 10.44 | 0.50 | 0.23 | 44.21 | 9.55 | 0.46 | 0.07 | 42.26 | 11.02 | 0.72 | 0.77 |
| LDL-C (mg/dL) *** | 79.67 | 32.08 | 0.61 | 0.33 | 86.24 | 35.61 | 1.35 | 4.74 | 122.13 | 36.22 | 0.26 | 0.61 |
| Apo A1 (mg/dL) *** | 108.84 | 18.19 | 1.17 | 4.69 | 116.49 | 21.59 | 1.23 | 2.81 | 122.85 | 23.07 | 1.06 | 6.53 |
| Apo B (mg/dL) *** | 46.76 | 13.39 | 0.35 | 1.80 | 49.70 | 13.87 | 0.14 | 0.46 | 64.53 | 18.85 | 1.64 | 5.32 |
| Smoking *** | 1 (0.3%) | 35 (10.5%) | 159 (35.8%) | |||||||||
| Alcohol drinking *** | 1 (0.3%) | 25 (7.5%) | 173 (39.0%) | |||||||||
*: p < 0.05, ** p < 0.01, *** p < 0.001 among group difference by ANOVA (for continuous variables) or chi-square test (for categorical variables). Abbreviated: BMI: body mass index, SBP: systolic blood pressure, DBP: diastolic blood pressure, BH: body height, BW: body weight, TC: total cholesterol, TG: triglyceride, HDL-C: high density lipoprotein cholesterol; LDL-C: low density lipoprotein cholesterol, Apo: apolipoprotein.
Familial correlation coefficients of residual Apo A1 levels in this family study
| Correlation in Apo A1 | |||
| No. of pairs | Equal weight to pairs | Equal weight to pedigrees | |
| Mother-Father | 156 | 0.218 | 0.218 |
| Parental-Offspring | 893 | 0.122 | 0.103 |
| Sibling | 450 | 0.119 | 0.128 |
| Mother-Daughter | 240 | 0.181 | 0.188 |
| Mother-Son | 216 | 0.107 | 0.091 |
| Father-Daughter | 233 | 0.087 | 0.046 |
| Father-Son | 204 | 0.109 | 0.105 |
| Sister-Sister | 136 | 0.231 | 0.158 |
| Sister-Brother | 221 | 0.079 | 0.111 |
| Brother-Brother | 93 | -0.002 | 0.037 |
Parameter estimates from segregation analysis of residual Apo A1 levels under Class D regressive models, conditional on proband phenotypes
| Model | Sporadic | Familial correlations | Environmental | Mendelian | General |
| qA | [1] | [1] | 0.974 | 0.854 | 0.976 |
| τAA | - | - | =qA | [1] | 0.971 |
| τAB | - | - | =qA | [0.5] | 0.989 |
| τBB | - | - | =qA | [0] | 1.000 |
| AA | 118.0 | 118.4 | 115.8 | 118.2 | 115.9 |
| AB | = AA | = AA | 167.2 | 114.2 | 167.3 |
| BB | = AA | = AA | 287.7 | 195.9 | 287.8 |
| σ2 | 492.9 | 493.2 | 331.9 | 390.3 | 333.3 |
| ρMF | [0] | 0.240 | 0.302 | 0.267 | 0.301 |
| ρMO | [0] | 0.129 | 0.263 | 0.204 | 0.266 |
| ρFO | [0] | 0.081 | 0.148 | 0.149 | 0.148 |
| ρSS | [0] | 0.000 | 0.114 | 0.088 | 0.115 |
| Parameter # | 2 | 6 | 9 | 9 | 12 |
| -2ln(L) | 6453.22 | 6435.17 | 6327.62 | 6361.51 | 6327.32 |
| AIC | 6457.22 | 6447.17 | 6345.62 | 6370.51 | 6351.32 |
| χ2 | 125.9 | 107.85 | 0.30 | 34.19 | - |
| 0.000 | 0.000 | 0.960 | 0.000 | - |
Abbreviation: #, number of parameters; SEM, standard error of mean; qA, gene frequency; τAA, τAB, τBB, transmission probability; μAA, μAB, μBB, genotype means; σ2, variance; ρMF, ρMO, ρFO, ρSS, correlation coefficients among spouse, mother-offspring, father-offspring and sibling pairs; #, number of parameters; ln(L), logarithm of likelihood; AIC, Akaike information criteria; P, significance level compared with the unrestricted general model.
Figure 1Sensitivity analysis of -2lnL by initial gene frequency values from 0.01 to 0.99, in steps of 0.01, under the Mendelian model of residual Apo A1 levels in this family study.
Figure 2Distribution of families favoring the environmental or Mendelian model in segregation analysis of residual Apo A in this family study, presented by the -2ln(LE/LM) ratio, LE: likelihood of environmental model, LM: likelihood of Mendelian model.