Literature DB >> 16411738

Structure-function relationships of EcDOS, a heme-regulated phosphodiesterase from Escherichia coli.

Yukie Sasakura1, Tokiko Yoshimura-Suzuki, Hirofumi Kurokawa, Toru Shimizu.   

Abstract

Recent studies have revealed a new class of heme enzymes, the heme-based sensors, which are able to turn on or off cellular signal transduction pathways in response to environmental changes. One of these enzymes is the heme-regulated phosphodiesterase from Escherichia coli (EcDOS). This protein is composed of an N-terminal heme-containing PAS domain and a C-terminal functional domain. PAS is an acronym formed from the names of the Drosophila period clock protein (PER), vertebrate aryl hydrocarbon receptor nuclear translocator (ARNT), and Drosophila single-minded protein (SIM). The heme cofactor in its PAS domain can act as a sensor of the cellular redox state that regulates the adenosine 3',5'-cyclic monophosphate (cAMP) phosphodiesterase activity. The crystal structures of its heme-containing PAS domain have helped clarify how the heme redox-dependent structural changes initiate intramolecular signal transduction. Here, we review recent findings on the structure-function relationships of EcDOS.

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Year:  2006        PMID: 16411738     DOI: 10.1021/ar0501525

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  18 in total

1.  The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch.

Authors:  Katherine A Marvin; Robert L Kerby; Hwan Youn; Gary P Roberts; Judith N Burstyn
Journal:  Biochemistry       Date:  2008-08-02       Impact factor: 3.162

2.  Identification and functional and spectral characterization of a globin-coupled histidine kinase from Anaeromyxobacter sp. Fw109-5.

Authors:  Kenichi Kitanishi; Kazuo Kobayashi; Takeshi Uchida; Koichiro Ishimori; Jotaro Igarashi; Toru Shimizu
Journal:  J Biol Chem       Date:  2011-08-18       Impact factor: 5.157

3.  Heme ligand binding properties and intradimer interactions in the full-length sensor protein dos from Escherichia coli and its isolated heme domain.

Authors:  Christophe Lechauve; Latifa Bouzhir-Sima; Taku Yamashita; Michael C Marden; Marten H Vos; Ursula Liebl; Laurent Kiger
Journal:  J Biol Chem       Date:  2009-10-28       Impact factor: 5.157

Review 4.  Structural and mechanistic determinants of c-di-GMP signalling.

Authors:  Tilman Schirmer; Urs Jenal
Journal:  Nat Rev Microbiol       Date:  2009-10       Impact factor: 60.633

Review 5.  Heme-based globin-coupled oxygen sensors: linking oxygen binding to functional regulation of diguanylate cyclase, histidine kinase, and methyl-accepting chemotaxis.

Authors:  Markéta Martínková; Kenichi Kitanishi; Toru Shimizu
Journal:  J Biol Chem       Date:  2013-08-08       Impact factor: 5.157

6.  A heme-based redox sensor in the methanogenic archaeon Methanosarcina acetivorans.

Authors:  Bastian Molitor; Marc Stassen; Anuja Modi; Samir F El-Mashtoly; Christoph Laurich; Wolfgang Lubitz; John H Dawson; Michael Rother; Nicole Frankenberg-Dinkel
Journal:  J Biol Chem       Date:  2013-05-09       Impact factor: 5.157

7.  pH dependence of cyanide binding to the ferric heme domain of the direct oxygen sensor from Escherichia coli and the effect of alkaline denaturation.

Authors:  Anil K Bidwai; Esther Y Ok; James E Erman
Journal:  Biochemistry       Date:  2008-09-05       Impact factor: 3.162

8.  Met(104) is the CO-replaceable ligand at Fe(II) heme in the CO-sensing transcription factor BxRcoM-1.

Authors:  Hannah E Bowman; Matthew R Dent; Judith N Burstyn
Journal:  J Biol Inorg Chem       Date:  2016-06-09       Impact factor: 3.358

9.  Globin-coupled heme containing oxygen sensor soluble adenylate cyclase in Leishmania prevents cell death during hypoxia.

Authors:  Sumit Sen Santara; Jayasree Roy; Supratim Mukherjee; Moumita Bose; Rina Saha; Subrata Adak
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

10.  DevS oxy complex stability identifies this heme protein as a gas sensor in Mycobacterium tuberculosis dormancy.

Authors:  Alexandra Ioanoviciu; Yergalem T Meharenna; Thomas L Poulos; Paul R Ortiz de Montellano
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

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