Literature DB >> 23928310

Heme-based globin-coupled oxygen sensors: linking oxygen binding to functional regulation of diguanylate cyclase, histidine kinase, and methyl-accepting chemotaxis.

Markéta Martínková1, Kenichi Kitanishi, Toru Shimizu.   

Abstract

An emerging class of novel heme-based oxygen sensors containing a globin fold binds and senses environmental O2 via a heme iron complex. Structure-function relationships of oxygen sensors containing a heme-bound globin fold are different from those containing heme-bound PAS and GAF folds. It is thus worth reconsidering from an evolutionary perspective how heme-bound proteins with a globin fold similar to that of hemoglobin and myoglobin could act as O2 sensors. Here, we summarize the molecular mechanisms of heme-based oxygen sensors containing a globin fold in an effort to shed light on the O2-sensing properties and O2-stimulated catalytic enhancement observed for these proteins.

Entities:  

Keywords:  Chemotaxis; Cyclic GMP (cGMP); Heme; Hemoglobin; Histidine Kinases; Myoglobin; Oxygen Binding

Mesh:

Substances:

Year:  2013        PMID: 23928310      PMCID: PMC3784688          DOI: 10.1074/jbc.R113.473249

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  95 in total

1.  Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor.

Authors:  A L Chang; J R Tuckerman; G Gonzalez; R Mayer; H Weinhouse; G Volman; D Amikam; M Benziman; M A Gilles-Gonzalez
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

2.  Changing the ligand specificity of CooA, a highly specific heme-based CO sensor.

Authors:  Hwan Youn; Robert L Kerby; Gary P Roberts
Journal:  J Biol Chem       Date:  2004-08-23       Impact factor: 5.157

3.  Ligand migration in the apolar tunnel of Cerebratulus lacteus mini-hemoglobin.

Authors:  Alessandra Pesce; Marco Nardini; Sylvia Dewilde; Luciana Capece; Marcelo A Martí; Sonia Congia; Mallory D Salter; George C Blouin; Darío A Estrin; Paolo Ascenzi; Luc Moens; Martino Bolognesi; John S Olson
Journal:  J Biol Chem       Date:  2010-12-07       Impact factor: 5.157

4.  Archaeal protoglobin structure indicates new ligand diffusion paths and modulation of haem-reactivity.

Authors:  Marco Nardini; Alessandra Pesce; Liesbet Thijs; Jennifer A Saito; Sylvia Dewilde; Maqsudul Alam; Paolo Ascenzi; Massimiliano Coletta; Chiara Ciaccio; Luc Moens; Martino Bolognesi
Journal:  EMBO Rep       Date:  2008-01-11       Impact factor: 8.807

5.  A proximal arginine R206 participates in switching of the Bradyrhizobium japonicum FixL oxygen sensor.

Authors:  Marie-Alda Gilles-Gonzalez; Ana Isabel Caceres; Eduardo Henrique Silva Sousa; Diana R Tomchick; Chad Brautigam; Constancio Gonzalez; Mischa Machius
Journal:  J Mol Biol       Date:  2006-05-11       Impact factor: 5.469

6.  The structure of Ascaris hemoglobin domain I at 2.2 A resolution: molecular features of oxygen avidity.

Authors:  J Yang; A P Kloek; D E Goldberg; F S Mathews
Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-09       Impact factor: 11.205

7.  Two ligand-binding sites in the O2-sensing signal transducer HemAT: implications for ligand recognition/discrimination and signaling.

Authors:  Eftychia Pinakoulaki; Hideaki Yoshimura; Vangelis Daskalakis; Shiro Yoshioka; Shigetoshi Aono; Constantinos Varotsis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

Review 8.  How do heme-protein sensors exclude oxygen? Lessons learned from cytochrome c', Nostoc puntiforme heme nitric oxide/oxygen-binding domain, and soluble guanylyl cyclase.

Authors:  Ah-Lim Tsai; Emil Martin; Vladimir Berka; John S Olson
Journal:  Antioxid Redox Signal       Date:  2012-04-10       Impact factor: 8.401

9.  Ligand dynamics and early signaling events in the heme domain of the sensor protein Dos from Escherichia coli.

Authors:  Taku Yamashita; Latifa Bouzhir-Sima; Jean-Christophe Lambry; Ursula Liebl; Marten H Vos
Journal:  J Biol Chem       Date:  2007-11-25       Impact factor: 5.157

10.  HisE11 and HisF8 provide bis-histidyl heme hexa-coordination in the globin domain of Geobacter sulfurreducens globin-coupled sensor.

Authors:  Alessandra Pesce; Liesbet Thijs; Marco Nardini; Filip Desmet; Lorenza Sisinni; Louise Gourlay; Alessandro Bolli; Massimiliano Coletta; Sabine Van Doorslaer; Xuehua Wan; Maqsudul Alam; Paolo Ascenzi; Luc Moens; Martino Bolognesi; Sylvia Dewilde
Journal:  J Mol Biol       Date:  2008-12-16       Impact factor: 5.469

View more
  18 in total

Review 1.  Microbial Surface Colonization and Biofilm Development in Marine Environments.

Authors:  Hongyue Dang; Charles R Lovell
Journal:  Microbiol Mol Biol Rev       Date:  2015-12-23       Impact factor: 11.056

2.  TMEM14C is required for erythroid mitochondrial heme metabolism.

Authors:  Yvette Y Yien; Raymond F Robledo; Iman J Schultz; Naoko Takahashi-Makise; Babette Gwynn; Daniel E Bauer; Abhishek Dass; Gloria Yi; Liangtao Li; Gordon J Hildick-Smith; Jeffrey D Cooney; Eric L Pierce; Kyla Mohler; Tamara A Dailey; Non Miyata; Paul D Kingsley; Caterina Garone; Shilpa M Hattangadi; Hui Huang; Wen Chen; Ellen M Keenan; Dhvanit I Shah; Thorsten M Schlaeger; Salvatore DiMauro; Stuart H Orkin; Alan B Cantor; James Palis; Carla M Koehler; Harvey F Lodish; Jerry Kaplan; Diane M Ward; Harry A Dailey; John D Phillips; Luanne L Peters; Barry H Paw
Journal:  J Clin Invest       Date:  2014-08-26       Impact factor: 14.808

3.  Histidine-Lysine Axial Ligand Switching in a Hemoglobin: A Role for Heme Propionates.

Authors:  Dillon B Nye; Matthew R Preimesberger; Ananya Majumdar; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2018-01-10       Impact factor: 3.162

4.  Characterization of unusual truncated hemoglobins of Chlamydomonas reinhardtii suggests specialized functions.

Authors:  Dennis Huwald; Peer Schrapers; Ramona Kositzki; Michael Haumann; Anja Hemschemeier
Journal:  Planta       Date:  2015-04-19       Impact factor: 4.116

5.  Disruption of the dimerization interface of the sensing domain in the dimeric heme-based oxygen sensor AfGcHK abolishes bacterial signal transduction.

Authors:  Tereza Skalova; Alzbeta Lengalova; Jan Dohnalek; Karl Harlos; Peter Mihalcin; Petr Kolenko; Martin Stranava; Jan Blaha; Toru Shimizu; Markéta Martínková
Journal:  J Biol Chem       Date:  2019-12-30       Impact factor: 5.157

6.  Coordination and redox state-dependent structural changes of the heme-based oxygen sensor AfGcHK associated with intraprotein signal transduction.

Authors:  Martin Stranava; Petr Man; Tereza Skálová; Petr Kolenko; Jan Blaha; Veronika Fojtikova; Václav Martínek; Jan Dohnálek; Alzbeta Lengalova; Michal Rosůlek; Toru Shimizu; Markéta Martínková
Journal:  J Biol Chem       Date:  2017-11-01       Impact factor: 5.157

7.  Gas Sensing and Signaling in the PAS-Heme Domain of the Pseudomonas aeruginosa Aer2 Receptor.

Authors:  Darysbel Garcia; Emilie Orillard; Mark S Johnson; Kylie J Watts
Journal:  J Bacteriol       Date:  2017-08-22       Impact factor: 3.490

8.  A Chemotaxis Receptor Modulates Nodulation during the Azorhizobium caulinodans-Sesbania rostrata Symbiosis.

Authors:  Nan Jiang; Wei Liu; Yan Li; Hailong Wu; Zhenhai Zhang; Gladys Alexandre; Claudine Elmerich; Zhihong Xie
Journal:  Appl Environ Microbiol       Date:  2016-05-16       Impact factor: 4.792

Review 9.  Mechanism and Role of Globin-Coupled Sensor Signalling.

Authors:  Johnnie A Walker; Shannon Rivera; Emily E Weinert
Journal:  Adv Microb Physiol       Date:  2017-07-06       Impact factor: 3.517

10.  FAM210B is an erythropoietin target and regulates erythroid heme synthesis by controlling mitochondrial iron import and ferrochelatase activity.

Authors:  Yvette Y Yien; Jiahai Shi; Caiyong Chen; Jesmine T M Cheung; Anthony S Grillo; Rishna Shrestha; Liangtao Li; Xuedi Zhang; Martin D Kafina; Paul D Kingsley; Matthew J King; Julien Ablain; Hojun Li; Leonard I Zon; James Palis; Martin D Burke; Daniel E Bauer; Stuart H Orkin; Carla M Koehler; John D Phillips; Jerry Kaplan; Diane M Ward; Harvey F Lodish; Barry H Paw
Journal:  J Biol Chem       Date:  2018-10-26       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.